Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RPL39P62891 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.28□□□□□ -0.44
RPL39P62891 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RPL39P62891 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.27□□□□□ -0.44
RPL39P62891 AC068418.2-201ENST00000577309 3703 ntBASIC12.27□□□□□ -0.44
RPL39P62891 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
RPL39P62891 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.27□□□□□ -0.44
RPL39P62891 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.27□□□□□ -0.44
RPL39P62891 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RPL39P62891 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RPL39P62891 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.27□□□□□ -0.44
RPL39P62891 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RPL39P62891 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
RPL39P62891 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.27□□□□□ -0.44
RPL39P62891 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RPL39P62891 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.27□□□□□ -0.44
RPL39P62891 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RPL39P62891 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RPL39P62891 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
RPL39P62891 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
RPL39P62891 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.27□□□□□ -0.45
RPL39P62891 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 AC007663.1-201ENST00000438948 1240 ntBASIC12.27□□□□□ -0.45
RPL39P62891 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.27□□□□□ -0.45
RPL39P62891 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.27□□□□□ -0.45
RPL39P62891 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 AC113404.2-201ENST00000507884 177 ntBASIC12.27□□□□□ -0.45
RPL39P62891 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.27□□□□□ -0.45
RPL39P62891 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.27□□□□□ -0.45
RPL39P62891 MIR3917-201ENST00000580971 93 ntBASIC12.27□□□□□ -0.45
RPL39P62891 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.27□□□□□ -0.45
RPL39P62891 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 AL139327.4-201ENST00000612362 153 ntBASIC12.27□□□□□ -0.45
RPL39P62891 AC113410.3-201ENST00000623366 203 ntBASIC12.27□□□□□ -0.45
RPL39P62891 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.27□□□□□ -0.45
RPL39P62891 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
RPL39P62891 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
RPL39P62891 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RPL39P62891 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.27□□□□□ -0.45
RPL39P62891 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RPL39P62891 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RPL39P62891 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.26□□□□□ -0.45
RPL39P62891 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RPL39P62891 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RPL39P62891 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RPL39P62891 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RPL39P62891 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RPL39P62891 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.26□□□□□ -0.45
RPL39P62891 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
RPL39P62891 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RPL39P62891 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RPL39P62891 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RPL39P62891 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RPL39P62891 AC007950.2-201ENST00000615045 2347 ntBASIC12.26□□□□□ -0.45
RPL39P62891 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms