Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.91□□□□□ -0.18
PAX9P55771 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 HLA-A-202ENST00000376806 1854 ntBASIC13.91□□□□□ -0.18
PAX9P55771 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
PAX9P55771 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PAX9P55771 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.91□□□□□ -0.18
PAX9P55771 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PAX9P55771 AC024909.3-201ENST00000611513 2257 ntBASIC13.9□□□□□ -0.18
PAX9P55771 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PAX9P55771 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PAX9P55771 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
PAX9P55771 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PAX9P55771 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
PAX9P55771 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.9□□□□□ -0.18
PAX9P55771 TSPY7P-201ENST00000431358 1114 ntBASIC13.9□□□□□ -0.18
PAX9P55771 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.9□□□□□ -0.18
PAX9P55771 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.9□□□□□ -0.18
PAX9P55771 EGFEM1P-202ENST00000431685 1563 ntBASIC13.9□□□□□ -0.18
PAX9P55771 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 PAUPAR-201ENST00000630360 2965 ntBASIC13.9□□□□□ -0.18
PAX9P55771 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.9□□□□□ -0.18
PAX9P55771 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.9□□□□□ -0.18
PAX9P55771 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX9P55771 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
PAX9P55771 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PAX9P55771 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PAX9P55771 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PAX9P55771 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PAX9P55771 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PAX9P55771 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PAX9P55771 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
PAX9P55771 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 AL365203.3-201ENST00000609742 2057 ntBASIC13.89□□□□□ -0.19
PAX9P55771 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PAX9P55771 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 AC010460.3-201ENST00000511359 1579 ntBASIC13.89□□□□□ -0.19
PAX9P55771 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.89□□□□□ -0.19
PAX9P55771 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.89□□□□□ -0.19
PAX9P55771 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.89□□□□□ -0.19
PAX9P55771 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.89□□□□□ -0.19
PAX9P55771 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PAX9P55771 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.89□□□□□ -0.19
PAX9P55771 MTCL1P1-201ENST00000446207 792 ntBASIC13.89□□□□□ -0.19
PAX9P55771 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.89□□□□□ -0.19
PAX9P55771 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.89□□□□□ -0.19
PAX9P55771 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.89□□□□□ -0.19
PAX9P55771 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.89□□□□□ -0.19
PAX9P55771 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.89□□□□□ -0.19
PAX9P55771 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.89□□□□□ -0.19
PAX9P55771 AL512604.3-201ENST00000569583 964 ntBASIC13.89□□□□□ -0.19
PAX9P55771 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PAX9P55771 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.89□□□□□ -0.19
PAX9P55771 AC079602.3-201ENST00000623931 403 ntBASIC13.89□□□□□ -0.19
PAX9P55771 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PAX9P55771 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.89□□□□□ -0.19
PAX9P55771 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PAX9P55771 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX9P55771 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms