Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.06■□□□□ 0.32
LIMK1P53667 PTCHD3P3-201ENST00000403073 906 ntBASIC17.06■□□□□ 0.32
LIMK1P53667 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.06■□□□□ 0.32
LIMK1P53667 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.06■□□□□ 0.32
LIMK1P53667 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.06■□□□□ 0.32
LIMK1P53667 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.06■□□□□ 0.32
LIMK1P53667 CXCL1P1-201ENST00000502804 216 ntBASIC17.06■□□□□ 0.32
LIMK1P53667 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.06■□□□□ 0.32
LIMK1P53667 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.06■□□□□ 0.32
LIMK1P53667 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.06■□□□□ 0.32
LIMK1P53667 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 MIR6752-201ENST00000618442 71 ntBASIC17.06■□□□□ 0.32
LIMK1P53667 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.06■□□□□ 0.32
LIMK1P53667 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.06■□□□□ 0.32
LIMK1P53667 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.06■□□□□ 0.32
LIMK1P53667 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LIMK1P53667 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LIMK1P53667 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.06■□□□□ 0.32
LIMK1P53667 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK1P53667 AC009053.2-201ENST00000563701 2365 ntBASIC17.06■□□□□ 0.32
LIMK1P53667 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
LIMK1P53667 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 AC099343.3-201ENST00000605834 2503 ntBASIC17.05■□□□□ 0.32
LIMK1P53667 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LIMK1P53667 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LIMK1P53667 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.05■□□□□ 0.32
LIMK1P53667 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK1P53667 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.05■□□□□ 0.32
LIMK1P53667 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.05■□□□□ 0.32
LIMK1P53667 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.05■□□□□ 0.32
LIMK1P53667 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.05■□□□□ 0.32
LIMK1P53667 AC008761.3-201ENST00000624803 892 ntBASIC17.05■□□□□ 0.32
LIMK1P53667 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.05■□□□□ 0.32
LIMK1P53667 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LIMK1P53667 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
LIMK1P53667 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.05■□□□□ 0.32
LIMK1P53667 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LIMK1P53667 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK1P53667 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.04■□□□□ 0.32
LIMK1P53667 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LIMK1P53667 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.04■□□□□ 0.32
LIMK1P53667 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 AC099398.1-201ENST00000567919 2776 ntBASIC17.04■□□□□ 0.32
LIMK1P53667 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 MIR661-201ENST00000384842 89 ntBASIC17.04■□□□□ 0.32
LIMK1P53667 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.04■□□□□ 0.32
LIMK1P53667 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.04■□□□□ 0.32
LIMK1P53667 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.04■□□□□ 0.32
LIMK1P53667 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LIMK1P53667 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.04■□□□□ 0.32
LIMK1P53667 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.04■□□□□ 0.32
LIMK1P53667 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.04■□□□□ 0.32
LIMK1P53667 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.04■□□□□ 0.32
LIMK1P53667 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.04■□□□□ 0.32
LIMK1P53667 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.04■□□□□ 0.32
LIMK1P53667 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK1P53667 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK1P53667 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK1P53667 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK1P53667 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.03■□□□□ 0.32
LIMK1P53667 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LIMK1P53667 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.03■□□□□ 0.32
LIMK1P53667 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK1P53667 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms