Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.26■□□□□ 0.19
SMSP52788 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SMSP52788 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SMSP52788 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.26■□□□□ 0.19
SMSP52788 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 AC116407.2-201ENST00000613639 860 ntBASIC16.26■□□□□ 0.19
SMSP52788 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMSP52788 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SMSP52788 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SMSP52788 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SMSP52788 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.26■□□□□ 0.19
SMSP52788 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.26■□□□□ 0.19
SMSP52788 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMSP52788 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.26■□□□□ 0.19
SMSP52788 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMSP52788 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMSP52788 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMSP52788 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
SMSP52788 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.25■□□□□ 0.19
SMSP52788 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.25■□□□□ 0.19
SMSP52788 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.25■□□□□ 0.19
SMSP52788 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SMSP52788 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.25■□□□□ 0.19
SMSP52788 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.25■□□□□ 0.19
SMSP52788 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.25■□□□□ 0.19
SMSP52788 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.25■□□□□ 0.19
SMSP52788 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.25■□□□□ 0.19
SMSP52788 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.25■□□□□ 0.19
SMSP52788 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.25■□□□□ 0.19
SMSP52788 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.25■□□□□ 0.19
SMSP52788 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMSP52788 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMSP52788 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 AC011676.5-201ENST00000624864 2660 ntBASIC16.25■□□□□ 0.19
SMSP52788 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.25■□□□□ 0.19
SMSP52788 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 AC011270.2-201ENST00000624293 2550 ntBASIC16.25■□□□□ 0.19
SMSP52788 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMSP52788 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SMSP52788 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMSP52788 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMSP52788 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMSP52788 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.24■□□□□ 0.19
SMSP52788 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SMSP52788 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SMSP52788 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.24■□□□□ 0.19
SMSP52788 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SMSP52788 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SMSP52788 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SMSP52788 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMSP52788 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SMSP52788 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.24■□□□□ 0.19
SMSP52788 KRT18P67-201ENST00000432816 1264 ntBASIC16.24■□□□□ 0.19
SMSP52788 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.24■□□□□ 0.19
SMSP52788 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.24■□□□□ 0.19
SMSP52788 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMSP52788 KRT18P58-201ENST00000527480 1120 ntBASIC16.24■□□□□ 0.19
SMSP52788 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SMSP52788 AC139530.3-201ENST00000620344 690 ntBASIC16.24■□□□□ 0.19
SMSP52788 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.24■□□□□ 0.19
SMSP52788 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.24■□□□□ 0.19
SMSP52788 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMSP52788 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMSP52788 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMSP52788 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.24■□□□□ 0.19
SMSP52788 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms