Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN2P51788 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CLCN2P51788 AC011840.4-201ENST00000578471 627 ntBASIC16.8■□□□□ 0.28
CLCN2P51788 Z69720.1-201ENST00000601483 472 ntBASIC16.8■□□□□ 0.28
CLCN2P51788 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN2P51788 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN2P51788 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN2P51788 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN2P51788 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN2P51788 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN2P51788 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN2P51788 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN2P51788 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN2P51788 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN2P51788 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN2P51788 CYP2T1P-202ENST00000641596 2535 ntBASIC16.79■□□□□ 0.28
CLCN2P51788 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLCN2P51788 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN2P51788 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN2P51788 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN2P51788 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN2P51788 AP000867.3-201ENST00000524675 377 ntBASIC16.79■□□□□ 0.28
CLCN2P51788 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN2P51788 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN2P51788 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 AC009154.2-201ENST00000621177 724 ntBASIC16.79■□□□□ 0.28
CLCN2P51788 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLCN2P51788 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN2P51788 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CLCN2P51788 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLCN2P51788 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN2P51788 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN2P51788 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN2P51788 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLCN2P51788 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CLCN2P51788 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCN2P51788 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN2P51788 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 AC092850.2-201ENST00000623821 2697 ntBASIC16.78■□□□□ 0.28
CLCN2P51788 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN2P51788 AC022898.2-201ENST00000616822 1312 ntBASIC16.78■□□□□ 0.28
CLCN2P51788 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN2P51788 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLCN2P51788 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN2P51788 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCN2P51788 AC246785.2-201ENST00000432512 513 ntBASIC16.78■□□□□ 0.28
CLCN2P51788 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCN2P51788 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLCN2P51788 AC012615.1-201ENST00000565797 1299 ntBASIC16.78■□□□□ 0.28
CLCN2P51788 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN2P51788 CLEC4GP1-201ENST00000596555 870 ntBASIC16.78■□□□□ 0.28
CLCN2P51788 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCN2P51788 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCN2P51788 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN2P51788 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CLCN2P51788 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN2P51788 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN2P51788 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLCN2P51788 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CLCN2P51788 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN2P51788 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLCN2P51788 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCN2P51788 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms