Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP11P51784 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.51■□□□□ 0.71
USP11P51784 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
USP11P51784 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
USP11P51784 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.51■□□□□ 0.71
USP11P51784 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
USP11P51784 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.5■□□□□ 0.71
USP11P51784 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.5■□□□□ 0.71
USP11P51784 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.5■□□□□ 0.71
USP11P51784 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.5■□□□□ 0.71
USP11P51784 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.5■□□□□ 0.71
USP11P51784 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.5■□□□□ 0.71
USP11P51784 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.5■□□□□ 0.71
USP11P51784 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.5■□□□□ 0.71
USP11P51784 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.5■□□□□ 0.71
USP11P51784 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 LINC02012-201ENST00000608206 1725 ntBASIC19.5■□□□□ 0.71
USP11P51784 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.5■□□□□ 0.71
USP11P51784 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 AL645608.8-201ENST00000606034 2086 ntBASIC19.5■□□□□ 0.71
USP11P51784 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP11P51784 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.5■□□□□ 0.71
USP11P51784 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP11P51784 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.49■□□□□ 0.71
USP11P51784 PI4KAP1-204ENST00000612579 1703 ntBASIC19.49■□□□□ 0.71
USP11P51784 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP11P51784 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP11P51784 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.49■□□□□ 0.71
USP11P51784 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
USP11P51784 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP11P51784 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
USP11P51784 AC120114.3-201ENST00000611923 658 ntBASIC19.49■□□□□ 0.71
USP11P51784 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.49■□□□□ 0.71
USP11P51784 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
USP11P51784 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP11P51784 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.49■□□□□ 0.71
USP11P51784 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP11P51784 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
USP11P51784 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP11P51784 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.49■□□□□ 0.71
USP11P51784 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP11P51784 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP11P51784 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
USP11P51784 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
USP11P51784 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.48■□□□□ 0.71
USP11P51784 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
USP11P51784 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.48■□□□□ 0.71
USP11P51784 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.48■□□□□ 0.71
USP11P51784 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.48■□□□□ 0.71
USP11P51784 AC009947.1-201ENST00000444350 727 ntBASIC19.48■□□□□ 0.71
USP11P51784 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.48■□□□□ 0.71
USP11P51784 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.48■□□□□ 0.71
USP11P51784 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
USP11P51784 Z83851.2-201ENST00000609564 659 ntBASIC19.48■□□□□ 0.71
USP11P51784 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
USP11P51784 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
USP11P51784 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP11P51784 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
USP11P51784 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.47■□□□□ 0.71
USP11P51784 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP11P51784 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
USP11P51784 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms