Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCA2P51587 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.11■□□□□ 0.65
BRCA2P51587 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRCA2P51587 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRCA2P51587 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCA2P51587 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.11■□□□□ 0.65
BRCA2P51587 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRCA2P51587 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCA2P51587 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.11■□□□□ 0.65
BRCA2P51587 INE1-201ENST00000456273 945 ntBASIC19.11■□□□□ 0.65
BRCA2P51587 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRCA2P51587 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.11■□□□□ 0.65
BRCA2P51587 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRCA2P51587 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.11■□□□□ 0.65
BRCA2P51587 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
BRCA2P51587 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.11■□□□□ 0.65
BRCA2P51587 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
BRCA2P51587 RN7SL752P-201ENST00000463779 287 ntBASIC19.11■□□□□ 0.65
BRCA2P51587 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.11■□□□□ 0.65
BRCA2P51587 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.11■□□□□ 0.65
BRCA2P51587 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRCA2P51587 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
BRCA2P51587 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.1■□□□□ 0.65
BRCA2P51587 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCA2P51587 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.1■□□□□ 0.65
BRCA2P51587 AL512638.1-201ENST00000457493 794 ntBASIC19.1■□□□□ 0.65
BRCA2P51587 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.1■□□□□ 0.65
BRCA2P51587 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.1■□□□□ 0.65
BRCA2P51587 AC109635.5-201ENST00000533593 962 ntBASIC19.1■□□□□ 0.65
BRCA2P51587 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.1■□□□□ 0.65
BRCA2P51587 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCA2P51587 AC008494.3-201ENST00000606615 944 ntBASIC19.1■□□□□ 0.65
BRCA2P51587 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCA2P51587 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
BRCA2P51587 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.1■□□□□ 0.65
BRCA2P51587 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCA2P51587 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRCA2P51587 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCA2P51587 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCA2P51587 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.1■□□□□ 0.65
BRCA2P51587 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.1■□□□□ 0.65
BRCA2P51587 AL031598.1-201ENST00000561511 1773 ntBASIC19.1■□□□□ 0.65
BRCA2P51587 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRCA2P51587 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRCA2P51587 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCA2P51587 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
BRCA2P51587 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCA2P51587 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCA2P51587 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCA2P51587 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRCA2P51587 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
BRCA2P51587 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
BRCA2P51587 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
BRCA2P51587 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.1■□□□□ 0.65
BRCA2P51587 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.1■□□□□ 0.65
BRCA2P51587 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCA2P51587 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCA2P51587 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCA2P51587 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.1■□□□□ 0.65
BRCA2P51587 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
BRCA2P51587 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.09■□□□□ 0.65
BRCA2P51587 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.09■□□□□ 0.65
BRCA2P51587 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
BRCA2P51587 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
BRCA2P51587 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
BRCA2P51587 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
BRCA2P51587 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
BRCA2P51587 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.09■□□□□ 0.65
BRCA2P51587 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.09■□□□□ 0.65
BRCA2P51587 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.09■□□□□ 0.65
BRCA2P51587 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.09■□□□□ 0.65
BRCA2P51587 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.09■□□□□ 0.65
BRCA2P51587 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.09■□□□□ 0.65
BRCA2P51587 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.09■□□□□ 0.65
BRCA2P51587 RNA5SP423-201ENST00000517127 109 ntBASIC19.09■□□□□ 0.65
BRCA2P51587 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRCA2P51587 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.09■□□□□ 0.65
BRCA2P51587 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BRCA2P51587 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BRCA2P51587 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.08■□□□□ 0.65
BRCA2P51587 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.08■□□□□ 0.65
BRCA2P51587 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BRCA2P51587 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
BRCA2P51587 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BRCA2P51587 SPDYE18-201ENST00000510091 1050 ntBASIC19.08■□□□□ 0.65
BRCA2P51587 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms