Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CENPFP49454 AC093503.3-201ENST00000624917 2352 ntBASIC19.29■□□□□ 0.68
CENPFP49454 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.29■□□□□ 0.68
CENPFP49454 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CENPFP49454 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CENPFP49454 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CENPFP49454 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.29■□□□□ 0.68
CENPFP49454 AC027369.6-201ENST00000525520 931 ntBASIC19.29■□□□□ 0.68
CENPFP49454 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.29■□□□□ 0.68
CENPFP49454 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.29■□□□□ 0.68
CENPFP49454 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CENPFP49454 AC012317.2-201ENST00000623305 2251 ntBASIC19.28■□□□□ 0.68
CENPFP49454 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CENPFP49454 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CENPFP49454 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CENPFP49454 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.28■□□□□ 0.68
CENPFP49454 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CENPFP49454 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.28■□□□□ 0.68
CENPFP49454 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.28■□□□□ 0.68
CENPFP49454 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CENPFP49454 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CENPFP49454 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CENPFP49454 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CENPFP49454 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CENPFP49454 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.28■□□□□ 0.68
CENPFP49454 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CENPFP49454 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CENPFP49454 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CENPFP49454 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CENPFP49454 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.28■□□□□ 0.68
CENPFP49454 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.28■□□□□ 0.68
CENPFP49454 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CENPFP49454 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CENPFP49454 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CENPFP49454 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CENPFP49454 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CENPFP49454 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.27■□□□□ 0.68
CENPFP49454 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CENPFP49454 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CENPFP49454 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CENPFP49454 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CENPFP49454 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CENPFP49454 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.27■□□□□ 0.68
CENPFP49454 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CENPFP49454 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.27■□□□□ 0.68
CENPFP49454 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CENPFP49454 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CENPFP49454 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CENPFP49454 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.27■□□□□ 0.68
CENPFP49454 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CENPFP49454 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CENPFP49454 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CENPFP49454 AC092552.1-201ENST00000547243 906 ntBASIC19.27■□□□□ 0.68
CENPFP49454 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CENPFP49454 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.27■□□□□ 0.68
CENPFP49454 SPDYE12P-201ENST00000618416 771 ntBASIC19.27■□□□□ 0.68
CENPFP49454 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CENPFP49454 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CENPFP49454 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CENPFP49454 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.27■□□□□ 0.67
CENPFP49454 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.27■□□□□ 0.67
CENPFP49454 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.27■□□□□ 0.67
CENPFP49454 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CENPFP49454 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.27■□□□□ 0.67
CENPFP49454 SNX29P1-201ENST00000548357 1007 ntBASIC19.27■□□□□ 0.67
CENPFP49454 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CENPFP49454 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.27■□□□□ 0.67
CENPFP49454 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.26■□□□□ 0.67
CENPFP49454 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.26■□□□□ 0.67
CENPFP49454 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPFP49454 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPFP49454 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CENPFP49454 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CENPFP49454 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.26■□□□□ 0.67
CENPFP49454 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.26■□□□□ 0.67
CENPFP49454 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CENPFP49454 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPFP49454 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CENPFP49454 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.26■□□□□ 0.67
CENPFP49454 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPFP49454 WIZP1-201ENST00000531444 2299 ntBASIC19.26■□□□□ 0.67
CENPFP49454 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPFP49454 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CENPFP49454 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CENPFP49454 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.26■□□□□ 0.67
CENPFP49454 AC112492.5-201ENST00000421897 457 ntBASIC19.26■□□□□ 0.67
CENPFP49454 AL009183.1-201ENST00000603760 355 ntBASIC19.26■□□□□ 0.67
CENPFP49454 AL590560.3-201ENST00000623350 461 ntBASIC19.26■□□□□ 0.67
CENPFP49454 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.26■□□□□ 0.67
CENPFP49454 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPFP49454 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.26■□□□□ 0.67
CENPFP49454 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.26■□□□□ 0.67
CENPFP49454 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPFP49454 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPFP49454 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.25■□□□□ 0.67
CENPFP49454 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.25■□□□□ 0.67
CENPFP49454 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPFP49454 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPFP49454 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPFP49454 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms