Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GPR89P-201ENST00000407924 1495 ntBASIC18.12■□□□□ 0.49
SLC1A1P43005 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC1A1P43005 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC1A1P43005 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A1P43005 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 INTS4P1-201ENST00000438455 1935 ntBASIC18.11■□□□□ 0.49
SLC1A1P43005 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SLC1A1P43005 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC1A1P43005 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC1A1P43005 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC1A1P43005 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SLC1A1P43005 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC1A1P43005 KRT18P21-201ENST00000515767 1272 ntBASIC18.11■□□□□ 0.49
SLC1A1P43005 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SLC1A1P43005 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC1A1P43005 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC1A1P43005 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SLC1A1P43005 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC1A1P43005 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC1A1P43005 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC1A1P43005 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.11■□□□□ 0.49
SLC1A1P43005 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SLC1A1P43005 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A1P43005 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SLC1A1P43005 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
SLC1A1P43005 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC1A1P43005 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLC1A1P43005 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A1P43005 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A1P43005 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A1P43005 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SLC1A1P43005 AC092068.3-201ENST00000587894 2016 ntBASIC18.1■□□□□ 0.49
SLC1A1P43005 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLC1A1P43005 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A1P43005 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLC1A1P43005 OR6D1P-203ENST00000641209 4860 ntBASIC18.1■□□□□ 0.49
SLC1A1P43005 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A1P43005 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A1P43005 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.1■□□□□ 0.49
SLC1A1P43005 KRT17P6-201ENST00000453795 1220 ntBASIC18.1■□□□□ 0.49
SLC1A1P43005 MINOS1P3-201ENST00000457048 203 ntBASIC18.1■□□□□ 0.49
SLC1A1P43005 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC1A1P43005 TPSP2-201ENST00000561760 610 ntBASIC18.1■□□□□ 0.49
SLC1A1P43005 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A1P43005 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC1A1P43005 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A1P43005 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A1P43005 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC1A1P43005 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC1A1P43005 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A1P43005 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC1A1P43005 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC1A1P43005 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A1P43005 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A1P43005 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A1P43005 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A1P43005 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A1P43005 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLC1A1P43005 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A1P43005 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A1P43005 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A1P43005 FRMD8P1-201ENST00000440433 1524 ntBASIC18.09■□□□□ 0.49
SLC1A1P43005 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SLC1A1P43005 FLJ38576-201ENST00000623820 2459 ntBASIC18.09■□□□□ 0.49
SLC1A1P43005 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A1P43005 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.09■□□□□ 0.49
SLC1A1P43005 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A1P43005 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A1P43005 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A1P43005 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SLC1A1P43005 PCED1CP-201ENST00000419887 785 ntBASIC18.09■□□□□ 0.49
SLC1A1P43005 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A1P43005 AP002383.4-201ENST00000442518 975 ntBASIC18.09■□□□□ 0.49
SLC1A1P43005 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A1P43005 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC1A1P43005 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A1P43005 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC1A1P43005 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC1A1P43005 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC1A1P43005 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC1A1P43005 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC1A1P43005 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A1P43005 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SLC1A1P43005 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms