Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AC011495.1-201ENST00000498085 584 ntBASIC30.07■■■□□ 2.4
NCAPD3P42695 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
NCAPD3P42695 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC30.07■■■□□ 2.4
NCAPD3P42695 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC30.07■■■□□ 2.4
NCAPD3P42695 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC30.07■■■□□ 2.4
NCAPD3P42695 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC30.07■■■□□ 2.4
NCAPD3P42695 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
NCAPD3P42695 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
NCAPD3P42695 AL023806.1-201ENST00000603994 1649 ntBASIC30.07■■■□□ 2.4
NCAPD3P42695 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC30.06■■■□□ 2.4
NCAPD3P42695 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
NCAPD3P42695 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC30.06■■■□□ 2.4
NCAPD3P42695 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
NCAPD3P42695 PP14571-201ENST00000404327 934 ntTSL 2 BASIC30.06■■■□□ 2.4
NCAPD3P42695 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NCAPD3P42695 FUZ-207ENST00000526575 482 ntTSL 4 BASIC30.06■■■□□ 2.4
NCAPD3P42695 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC30.06■■■□□ 2.4
NCAPD3P42695 AL512343.1-201ENST00000605837 169 ntBASIC30.06■■■□□ 2.4
NCAPD3P42695 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
NCAPD3P42695 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
NCAPD3P42695 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC30.06■■■□□ 2.4
NCAPD3P42695 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
NCAPD3P42695 TOP3BP1-201ENST00000420768 1380 ntBASIC30.06■■■□□ 2.4
NCAPD3P42695 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC30.06■■■□□ 2.4
NCAPD3P42695 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
NCAPD3P42695 SPDYE18-201ENST00000510091 1050 ntBASIC30.06■■■□□ 2.4
NCAPD3P42695 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC30.06■■■□□ 2.4
NCAPD3P42695 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC30.06■■■□□ 2.4
NCAPD3P42695 SNX29P1-201ENST00000548357 1007 ntBASIC30.06■■■□□ 2.4
NCAPD3P42695 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC30.06■■■□□ 2.4
NCAPD3P42695 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
NCAPD3P42695 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
NCAPD3P42695 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC30.05■■■□□ 2.4
NCAPD3P42695 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC30.05■■■□□ 2.4
NCAPD3P42695 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
NCAPD3P42695 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
NCAPD3P42695 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
NCAPD3P42695 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
NCAPD3P42695 SLC7A15P-201ENST00000424028 1363 ntBASIC30.05■■■□□ 2.4
NCAPD3P42695 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC30.05■■■□□ 2.4
NCAPD3P42695 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
NCAPD3P42695 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
NCAPD3P42695 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
NCAPD3P42695 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC30.05■■■□□ 2.4
NCAPD3P42695 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC30.05■■■□□ 2.4
NCAPD3P42695 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC30.05■■■□□ 2.4
NCAPD3P42695 AC007431.3-201ENST00000623221 587 ntBASIC30.05■■■□□ 2.4
NCAPD3P42695 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC30.05■■■□□ 2.4
NCAPD3P42695 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
NCAPD3P42695 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
NCAPD3P42695 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC30.05■■■□□ 2.4
NCAPD3P42695 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
NCAPD3P42695 AL133338.1-201ENST00000565695 1517 ntBASIC30.04■■■□□ 2.4
NCAPD3P42695 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC30.04■■■□□ 2.4
NCAPD3P42695 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 FAM86MP-201ENST00000340703 885 ntBASIC30.04■■■□□ 2.4
NCAPD3P42695 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC30.04■■■□□ 2.4
NCAPD3P42695 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC30.04■■■□□ 2.4
NCAPD3P42695 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC30.04■■■□□ 2.4
NCAPD3P42695 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC30.04■■■□□ 2.4
NCAPD3P42695 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC30.04■■■□□ 2.4
NCAPD3P42695 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
NCAPD3P42695 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
NCAPD3P42695 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NCAPD3P42695 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
NCAPD3P42695 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC30.03■■■□□ 2.4
NCAPD3P42695 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NCAPD3P42695 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC30.03■■■□□ 2.4
NCAPD3P42695 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NCAPD3P42695 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC30.03■■■□□ 2.4
NCAPD3P42695 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC30.03■■■□□ 2.4
NCAPD3P42695 TMEM14DP-201ENST00000422205 345 ntBASIC30.03■■■□□ 2.4
NCAPD3P42695 AL353705.2-201ENST00000428243 662 ntBASIC30.03■■■□□ 2.4
NCAPD3P42695 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
NCAPD3P42695 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC30.03■■■□□ 2.4
NCAPD3P42695 RN7SL828P-201ENST00000607615 303 ntBASIC30.03■■■□□ 2.4
NCAPD3P42695 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC30.03■■■□□ 2.4
NCAPD3P42695 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NCAPD3P42695 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC30.03■■■□□ 2.4
NCAPD3P42695 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
NCAPD3P42695 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
NCAPD3P42695 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC30.03■■■□□ 2.4
NCAPD3P42695 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC30.03■■■□□ 2.4
NCAPD3P42695 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC30.03■■■□□ 2.4
NCAPD3P42695 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC30.03■■■□□ 2.4
NCAPD3P42695 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC30.02■■■□□ 2.4
NCAPD3P42695 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
NCAPD3P42695 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC30.02■■■□□ 2.4
NCAPD3P42695 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC30.02■■■□□ 2.4
NCAPD3P42695 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC30.02■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms