Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.43■□□□□ 0.38
CCNFP41002 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.43■□□□□ 0.38
CCNFP41002 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.43■□□□□ 0.38
CCNFP41002 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CCNFP41002 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCNFP41002 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.43■□□□□ 0.38
CCNFP41002 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.43■□□□□ 0.38
CCNFP41002 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.43■□□□□ 0.38
CCNFP41002 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 KRT18P1-202ENST00000452408 1331 ntBASIC17.43■□□□□ 0.38
CCNFP41002 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.43■□□□□ 0.38
CCNFP41002 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.43■□□□□ 0.38
CCNFP41002 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNFP41002 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCNFP41002 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCNFP41002 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNFP41002 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNFP41002 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCNFP41002 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCNFP41002 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNFP41002 MST1L-201ENST00000442552 2185 ntBASIC17.42■□□□□ 0.38
CCNFP41002 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCNFP41002 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNFP41002 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNFP41002 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNFP41002 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCNFP41002 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNFP41002 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.42■□□□□ 0.38
CCNFP41002 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCNFP41002 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.42■□□□□ 0.38
CCNFP41002 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNFP41002 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCNFP41002 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNFP41002 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNFP41002 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNFP41002 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNFP41002 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNFP41002 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.42■□□□□ 0.38
CCNFP41002 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNFP41002 OR6D1P-202ENST00000641007 5290 ntBASIC17.41■□□□□ 0.38
CCNFP41002 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.41■□□□□ 0.38
CCNFP41002 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.41■□□□□ 0.38
CCNFP41002 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.41■□□□□ 0.38
CCNFP41002 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.41■□□□□ 0.38
CCNFP41002 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCNFP41002 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCNFP41002 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCNFP41002 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCNFP41002 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
CCNFP41002 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.41■□□□□ 0.38
CCNFP41002 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 AL603756.1-201ENST00000606511 2163 ntBASIC17.41■□□□□ 0.38
CCNFP41002 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.41■□□□□ 0.38
CCNFP41002 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCNFP41002 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.41■□□□□ 0.38
CCNFP41002 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCNFP41002 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.41■□□□□ 0.38
CCNFP41002 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.41■□□□□ 0.38
CCNFP41002 DRAXINP1-201ENST00000437611 948 ntBASIC17.41■□□□□ 0.38
CCNFP41002 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.41■□□□□ 0.38
CCNFP41002 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.41■□□□□ 0.38
CCNFP41002 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.41■□□□□ 0.38
CCNFP41002 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CCNFP41002 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.41■□□□□ 0.38
CCNFP41002 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCNFP41002 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 AC078925.2-201ENST00000624013 1973 ntBASIC17.4■□□□□ 0.38
CCNFP41002 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCNFP41002 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCNFP41002 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms