Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 NCF1C-201ENST00000438382 1427 ntBASIC15.86■□□□□ 0.13
RFC3P40938 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.86■□□□□ 0.13
RFC3P40938 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.86■□□□□ 0.13
RFC3P40938 OR6D1P-202ENST00000641007 5290 ntBASIC15.86■□□□□ 0.13
RFC3P40938 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
RFC3P40938 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.86■□□□□ 0.13
RFC3P40938 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RFC3P40938 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RFC3P40938 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.86■□□□□ 0.13
RFC3P40938 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.86■□□□□ 0.13
RFC3P40938 PGAM5P1-201ENST00000518923 814 ntBASIC15.86■□□□□ 0.13
RFC3P40938 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.86■□□□□ 0.13
RFC3P40938 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RFC3P40938 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.86■□□□□ 0.13
RFC3P40938 AL139424.1-201ENST00000607572 797 ntBASIC15.86■□□□□ 0.13
RFC3P40938 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
RFC3P40938 FAM197Y3-203ENST00000618346 717 ntBASIC15.86■□□□□ 0.13
RFC3P40938 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.86■□□□□ 0.13
RFC3P40938 AC009336.1-201ENST00000608941 1553 ntBASIC15.86■□□□□ 0.13
RFC3P40938 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.86■□□□□ 0.13
RFC3P40938 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.86■□□□□ 0.13
RFC3P40938 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.86■□□□□ 0.13
RFC3P40938 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.86■□□□□ 0.13
RFC3P40938 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RFC3P40938 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.86■□□□□ 0.13
RFC3P40938 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC3P40938 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.85■□□□□ 0.13
RFC3P40938 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RFC3P40938 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.85■□□□□ 0.13
RFC3P40938 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.85■□□□□ 0.13
RFC3P40938 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.85■□□□□ 0.13
RFC3P40938 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RFC3P40938 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
RFC3P40938 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RFC3P40938 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RFC3P40938 MIR1233-2-201ENST00000408138 82 ntBASIC15.85■□□□□ 0.13
RFC3P40938 MIR1233-1-201ENST00000408722 82 ntBASIC15.85■□□□□ 0.13
RFC3P40938 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.85■□□□□ 0.13
RFC3P40938 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.85■□□□□ 0.13
RFC3P40938 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.85■□□□□ 0.13
RFC3P40938 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.85■□□□□ 0.13
RFC3P40938 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.85■□□□□ 0.13
RFC3P40938 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 REXO1L11P-201ENST00000620964 1927 ntBASIC15.85■□□□□ 0.13
RFC3P40938 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.85■□□□□ 0.13
RFC3P40938 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.85■□□□□ 0.13
RFC3P40938 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RFC3P40938 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RFC3P40938 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RFC3P40938 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFC3P40938 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.85■□□□□ 0.13
RFC3P40938 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RFC3P40938 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC3P40938 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.84■□□□□ 0.13
RFC3P40938 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RFC3P40938 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
RFC3P40938 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
RFC3P40938 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.84■□□□□ 0.13
RFC3P40938 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.84■□□□□ 0.13
RFC3P40938 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC3P40938 AC023274.1-201ENST00000418278 595 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms