Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GRIK1P39086 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GRIK1P39086 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GRIK1P39086 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.23■□□□□ 0.51
GRIK1P39086 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GRIK1P39086 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.23■□□□□ 0.51
GRIK1P39086 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.23■□□□□ 0.51
GRIK1P39086 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
GRIK1P39086 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GRIK1P39086 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GRIK1P39086 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GRIK1P39086 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GRIK1P39086 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.23■□□□□ 0.51
GRIK1P39086 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GRIK1P39086 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.22■□□□□ 0.51
GRIK1P39086 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
GRIK1P39086 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
GRIK1P39086 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
GRIK1P39086 AP002414.1-201ENST00000391405 1147 ntBASIC18.22■□□□□ 0.51
GRIK1P39086 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.22■□□□□ 0.51
GRIK1P39086 CRYGEP-201ENST00000412192 528 ntBASIC18.22■□□□□ 0.51
GRIK1P39086 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.22■□□□□ 0.51
GRIK1P39086 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.22■□□□□ 0.51
GRIK1P39086 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.22■□□□□ 0.51
GRIK1P39086 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
GRIK1P39086 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.22■□□□□ 0.51
GRIK1P39086 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 AC004790.2-201ENST00000623588 572 ntBASIC18.22■□□□□ 0.51
GRIK1P39086 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GRIK1P39086 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
GRIK1P39086 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GRIK1P39086 NOC2LP2-201ENST00000407594 1944 ntBASIC18.21■□□□□ 0.51
GRIK1P39086 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
GRIK1P39086 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIK1P39086 PI4KAP1-204ENST00000612579 1703 ntBASIC18.21■□□□□ 0.51
GRIK1P39086 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIK1P39086 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 AL133373.2-201ENST00000623187 2828 ntBASIC18.21■□□□□ 0.51
GRIK1P39086 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIK1P39086 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 RNA5SP416-201ENST00000516838 111 ntBASIC18.21■□□□□ 0.51
GRIK1P39086 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.21■□□□□ 0.51
GRIK1P39086 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIK1P39086 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.21■□□□□ 0.51
GRIK1P39086 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.21■□□□□ 0.51
GRIK1P39086 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.21■□□□□ 0.51
GRIK1P39086 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
GRIK1P39086 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.21■□□□□ 0.51
GRIK1P39086 AC023511.2-201ENST00000618803 211 ntBASIC18.21■□□□□ 0.51
GRIK1P39086 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.21■□□□□ 0.51
GRIK1P39086 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
GRIK1P39086 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.21■□□□□ 0.51
GRIK1P39086 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
GRIK1P39086 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.21■□□□□ 0.51
GRIK1P39086 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
GRIK1P39086 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GRIK1P39086 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.21■□□□□ 0.51
GRIK1P39086 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
GRIK1P39086 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIK1P39086 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
GRIK1P39086 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.2■□□□□ 0.5
GRIK1P39086 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIK1P39086 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIK1P39086 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIK1P39086 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
GRIK1P39086 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
GRIK1P39086 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
GRIK1P39086 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.2■□□□□ 0.5
GRIK1P39086 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GRIK1P39086 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.2■□□□□ 0.5
GRIK1P39086 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms