Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RFC1P35251 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC1P35251 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.25■□□□□ 0.51
RFC1P35251 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC1P35251 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC1P35251 AL135999.2-201ENST00000622438 1686 ntBASIC18.25■□□□□ 0.51
RFC1P35251 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC1P35251 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RFC1P35251 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RFC1P35251 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC1P35251 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC1P35251 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
RFC1P35251 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.25■□□□□ 0.51
RFC1P35251 KLF4P1-201ENST00000412782 1185 ntBASIC18.25■□□□□ 0.51
RFC1P35251 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.25■□□□□ 0.51
RFC1P35251 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.25■□□□□ 0.51
RFC1P35251 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC1P35251 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC1P35251 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC1P35251 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
RFC1P35251 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RFC1P35251 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RFC1P35251 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC1P35251 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RFC1P35251 PCDHA12-202ENST00000613593 2588 ntBASIC18.25■□□□□ 0.51
RFC1P35251 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
RFC1P35251 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC1P35251 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RFC1P35251 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RFC1P35251 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFC1P35251 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.24■□□□□ 0.51
RFC1P35251 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RFC1P35251 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RFC1P35251 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.24■□□□□ 0.51
RFC1P35251 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.24■□□□□ 0.51
RFC1P35251 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.24■□□□□ 0.51
RFC1P35251 AC132008.2-207ENST00000454517 770 ntBASIC18.24■□□□□ 0.51
RFC1P35251 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.24■□□□□ 0.51
RFC1P35251 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.24■□□□□ 0.51
RFC1P35251 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFC1P35251 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.24■□□□□ 0.51
RFC1P35251 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC1P35251 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RFC1P35251 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RFC1P35251 AC148477.5-201ENST00000625164 1645 ntBASIC18.23■□□□□ 0.51
RFC1P35251 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RFC1P35251 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RFC1P35251 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.23■□□□□ 0.51
RFC1P35251 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFC1P35251 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RFC1P35251 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.23■□□□□ 0.51
RFC1P35251 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.23■□□□□ 0.51
RFC1P35251 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
RFC1P35251 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC1P35251 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms