Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P31025 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P31025 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P31025 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P31025 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCN1P31025 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.05■□□□□ 0.16
LCN1P31025 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LCN1P31025 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.04■□□□□ 0.16
LCN1P31025 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.04■□□□□ 0.16
LCN1P31025 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.04■□□□□ 0.16
LCN1P31025 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P31025 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
LCN1P31025 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P31025 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 SPDYE21P-201ENST00000413323 827 ntBASIC16.04■□□□□ 0.16
LCN1P31025 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.04■□□□□ 0.16
LCN1P31025 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.04■□□□□ 0.16
LCN1P31025 SIGLEC30P-201ENST00000455569 941 ntBASIC16.04■□□□□ 0.16
LCN1P31025 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P31025 KRT18P31-201ENST00000506277 1292 ntBASIC16.04■□□□□ 0.16
LCN1P31025 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P31025 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P31025 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCN1P31025 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.04■□□□□ 0.16
LCN1P31025 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LCN1P31025 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LCN1P31025 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LCN1P31025 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 AP005117.1-201ENST00000584346 1413 ntBASIC16.03■□□□□ 0.16
LCN1P31025 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LCN1P31025 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.03■□□□□ 0.16
LCN1P31025 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.03■□□□□ 0.16
LCN1P31025 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.03■□□□□ 0.16
LCN1P31025 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LCN1P31025 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 PRYP5-201ENST00000451909 266 ntBASIC16.03■□□□□ 0.16
LCN1P31025 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.03■□□□□ 0.16
LCN1P31025 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LCN1P31025 AC091304.2-201ENST00000564639 760 ntBASIC16.03■□□□□ 0.16
LCN1P31025 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.03■□□□□ 0.16
LCN1P31025 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.03■□□□□ 0.16
LCN1P31025 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
LCN1P31025 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.03■□□□□ 0.16
LCN1P31025 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.03■□□□□ 0.16
LCN1P31025 OR6D1P-203ENST00000641209 4860 ntBASIC16.03■□□□□ 0.16
LCN1P31025 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
LCN1P31025 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LCN1P31025 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
LCN1P31025 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.03■□□□□ 0.16
LCN1P31025 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.03■□□□□ 0.16
LCN1P31025 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCN1P31025 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCN1P31025 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCN1P31025 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCN1P31025 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.02■□□□□ 0.16
LCN1P31025 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.02■□□□□ 0.16
LCN1P31025 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCN1P31025 AC116353.5-201ENST00000638148 1699 ntBASIC16.02■□□□□ 0.16
LCN1P31025 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.02■□□□□ 0.16
LCN1P31025 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCN1P31025 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCN1P31025 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.02■□□□□ 0.16
LCN1P31025 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
LCN1P31025 AC079776.2-201ENST00000641154 1609 ntBASIC16.02■□□□□ 0.16
LCN1P31025 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCN1P31025 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCN1P31025 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCN1P31025 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.02■□□□□ 0.16
LCN1P31025 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.02■□□□□ 0.16
LCN1P31025 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.02■□□□□ 0.16
LCN1P31025 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.02■□□□□ 0.16
LCN1P31025 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.02■□□□□ 0.16
LCN1P31025 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms