Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.66■□□□□ 0.74
CNGA1P29973 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.66■□□□□ 0.74
CNGA1P29973 AC004461.1-201ENST00000412461 403 ntBASIC19.66■□□□□ 0.74
CNGA1P29973 LINC00982-205ENST00000420957 435 ntBASIC19.66■□□□□ 0.74
CNGA1P29973 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 BCRP1-201ENST00000444246 691 ntBASIC19.66■□□□□ 0.74
CNGA1P29973 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.66■□□□□ 0.74
CNGA1P29973 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.66■□□□□ 0.74
CNGA1P29973 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.66■□□□□ 0.74
CNGA1P29973 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.66■□□□□ 0.74
CNGA1P29973 STK25P1-201ENST00000585406 838 ntBASIC19.66■□□□□ 0.74
CNGA1P29973 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.66■□□□□ 0.74
CNGA1P29973 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.66■□□□□ 0.74
CNGA1P29973 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 AL096865.1-201ENST00000606796 927 ntBASIC19.66■□□□□ 0.74
CNGA1P29973 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.66■□□□□ 0.74
CNGA1P29973 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.66■□□□□ 0.74
CNGA1P29973 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CNGA1P29973 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.66■□□□□ 0.74
CNGA1P29973 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.66■□□□□ 0.74
CNGA1P29973 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
CNGA1P29973 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CNGA1P29973 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CNGA1P29973 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CNGA1P29973 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CNGA1P29973 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNGA1P29973 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CNGA1P29973 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.65■□□□□ 0.74
CNGA1P29973 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.65■□□□□ 0.74
CNGA1P29973 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.65■□□□□ 0.74
CNGA1P29973 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 AC025678.2-201ENST00000562061 970 ntBASIC19.65■□□□□ 0.74
CNGA1P29973 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.65■□□□□ 0.74
CNGA1P29973 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.65■□□□□ 0.74
CNGA1P29973 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 AL353135.1-201ENST00000606729 504 ntBASIC19.65■□□□□ 0.74
CNGA1P29973 AC092902.6-201ENST00000641783 218 ntBASIC19.65■□□□□ 0.74
CNGA1P29973 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CNGA1P29973 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CNGA1P29973 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.65■□□□□ 0.74
CNGA1P29973 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNGA1P29973 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNGA1P29973 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNGA1P29973 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNGA1P29973 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNGA1P29973 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CNGA1P29973 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNGA1P29973 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNGA1P29973 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
CNGA1P29973 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNGA1P29973 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNGA1P29973 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.64■□□□□ 0.73
CNGA1P29973 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNGA1P29973 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.64■□□□□ 0.73
CNGA1P29973 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNGA1P29973 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNGA1P29973 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNGA1P29973 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNGA1P29973 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.64■□□□□ 0.73
CNGA1P29973 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.64■□□□□ 0.73
CNGA1P29973 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.64■□□□□ 0.73
CNGA1P29973 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.64■□□□□ 0.73
CNGA1P29973 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.64■□□□□ 0.73
CNGA1P29973 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.64■□□□□ 0.73
CNGA1P29973 AC116407.2-201ENST00000613639 860 ntBASIC19.64■□□□□ 0.73
CNGA1P29973 AL513210.1-201ENST00000629608 234 ntBASIC19.64■□□□□ 0.73
CNGA1P29973 AC105339.1-204ENST00000636249 355 ntBASIC19.64■□□□□ 0.73
CNGA1P29973 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNGA1P29973 AC020916.1-201ENST00000587762 1774 ntBASIC19.64■□□□□ 0.73
CNGA1P29973 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNGA1P29973 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
CNGA1P29973 AC100803.2-201ENST00000562459 1963 ntBASIC19.64■□□□□ 0.73
CNGA1P29973 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNGA1P29973 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.64■□□□□ 0.73
CNGA1P29973 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNGA1P29973 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNGA1P29973 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CNGA1P29973 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CNGA1P29973 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNGA1P29973 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms