Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 AL732292.2-201ENST00000609649 430 ntBASIC16.61■□□□□ 0.25
HTR1EP28566 AL121772.3-201ENST00000610840 674 ntBASIC16.61■□□□□ 0.25
HTR1EP28566 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTR1EP28566 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.61■□□□□ 0.25
HTR1EP28566 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HTR1EP28566 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTR1EP28566 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.61■□□□□ 0.25
HTR1EP28566 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.61■□□□□ 0.25
HTR1EP28566 LINC02012-201ENST00000608206 1725 ntBASIC16.61■□□□□ 0.25
HTR1EP28566 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTR1EP28566 AL603756.1-201ENST00000606511 2163 ntBASIC16.61■□□□□ 0.25
HTR1EP28566 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTR1EP28566 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTR1EP28566 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTR1EP28566 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.6■□□□□ 0.25
HTR1EP28566 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.6■□□□□ 0.25
HTR1EP28566 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.6■□□□□ 0.25
HTR1EP28566 AL160237.2-201ENST00000556165 472 ntBASIC16.6■□□□□ 0.25
HTR1EP28566 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.6■□□□□ 0.25
HTR1EP28566 AC046185.3-201ENST00000623228 1824 ntBASIC16.6■□□□□ 0.25
HTR1EP28566 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.6■□□□□ 0.25
HTR1EP28566 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
HTR1EP28566 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HTR1EP28566 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HTR1EP28566 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HTR1EP28566 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.6■□□□□ 0.25
HTR1EP28566 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR1EP28566 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HTR1EP28566 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1EP28566 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1EP28566 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 TSPY19P-201ENST00000418461 509 ntBASIC16.59■□□□□ 0.25
HTR1EP28566 TSPY18P-201ENST00000441642 509 ntBASIC16.59■□□□□ 0.25
HTR1EP28566 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1EP28566 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1EP28566 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.59■□□□□ 0.25
HTR1EP28566 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.59■□□□□ 0.25
HTR1EP28566 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1EP28566 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.59■□□□□ 0.25
HTR1EP28566 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
HTR1EP28566 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR1EP28566 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR1EP28566 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
HTR1EP28566 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR1EP28566 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR1EP28566 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
HTR1EP28566 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR1EP28566 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
HTR1EP28566 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR1EP28566 AC046158.3-201ENST00000624947 2558 ntBASIC16.58■□□□□ 0.25
HTR1EP28566 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR1EP28566 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.58■□□□□ 0.24
HTR1EP28566 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.58■□□□□ 0.24
HTR1EP28566 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.58■□□□□ 0.24
HTR1EP28566 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HTR1EP28566 AP000867.3-201ENST00000524675 377 ntBASIC16.58■□□□□ 0.24
HTR1EP28566 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.58■□□□□ 0.24
HTR1EP28566 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
HTR1EP28566 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.58■□□□□ 0.24
HTR1EP28566 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.58■□□□□ 0.24
HTR1EP28566 AL139327.4-201ENST00000612362 153 ntBASIC16.58■□□□□ 0.24
HTR1EP28566 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR1EP28566 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms