Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.27■□□□□ 0.35
HTR1BP28222 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.27■□□□□ 0.35
HTR1BP28222 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.26■□□□□ 0.35
HTR1BP28222 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 PMS2P7-201ENST00000506558 1336 ntBASIC17.26■□□□□ 0.35
HTR1BP28222 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
HTR1BP28222 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 AC148477.5-201ENST00000625164 1645 ntBASIC17.26■□□□□ 0.35
HTR1BP28222 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.26■□□□□ 0.35
HTR1BP28222 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HTR1BP28222 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.26■□□□□ 0.35
HTR1BP28222 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 MIR940-201ENST00000401276 94 ntBASIC17.26■□□□□ 0.35
HTR1BP28222 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.26■□□□□ 0.35
HTR1BP28222 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.26■□□□□ 0.35
HTR1BP28222 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.26■□□□□ 0.35
HTR1BP28222 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.26■□□□□ 0.35
HTR1BP28222 AL591424.1-201ENST00000442569 1213 ntBASIC17.26■□□□□ 0.35
HTR1BP28222 AC136632.2-201ENST00000512891 861 ntBASIC17.26■□□□□ 0.35
HTR1BP28222 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.26■□□□□ 0.35
HTR1BP28222 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.26■□□□□ 0.35
HTR1BP28222 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.26■□□□□ 0.35
HTR1BP28222 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.26■□□□□ 0.35
HTR1BP28222 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HTR1BP28222 AC027601.4-201ENST00000611259 610 ntBASIC17.26■□□□□ 0.35
HTR1BP28222 AC023511.2-201ENST00000618803 211 ntBASIC17.26■□□□□ 0.35
HTR1BP28222 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HTR1BP28222 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.26■□□□□ 0.35
HTR1BP28222 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HTR1BP28222 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1BP28222 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HTR1BP28222 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 AC009336.1-201ENST00000608941 1553 ntBASIC17.25■□□□□ 0.35
HTR1BP28222 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
HTR1BP28222 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 KRT18P27-201ENST00000427733 1299 ntBASIC17.25■□□□□ 0.35
HTR1BP28222 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.25■□□□□ 0.35
HTR1BP28222 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HTR1BP28222 POLD2P1-201ENST00000511220 997 ntBASIC17.25■□□□□ 0.35
HTR1BP28222 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HTR1BP28222 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.25■□□□□ 0.35
HTR1BP28222 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HTR1BP28222 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 AC134043.2-201ENST00000624206 2238 ntBASIC17.25■□□□□ 0.35
HTR1BP28222 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.25■□□□□ 0.35
HTR1BP28222 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.25■□□□□ 0.35
HTR1BP28222 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.25■□□□□ 0.35
HTR1BP28222 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.25■□□□□ 0.35
HTR1BP28222 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1BP28222 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HTR1BP28222 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HTR1BP28222 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.24■□□□□ 0.35
HTR1BP28222 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.24■□□□□ 0.35
HTR1BP28222 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.24■□□□□ 0.35
HTR1BP28222 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HTR1BP28222 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1BP28222 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1BP28222 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.24■□□□□ 0.35
HTR1BP28222 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1BP28222 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.24■□□□□ 0.35
HTR1BP28222 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1BP28222 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HTR1BP28222 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.24■□□□□ 0.35
HTR1BP28222 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms