Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CD40P25942 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CD40P25942 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CD40P25942 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CD40P25942 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.9□□□□□ -0.02
CD40P25942 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.9□□□□□ -0.02
CD40P25942 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 HCG4B-203ENST00000450128 991 ntBASIC14.9□□□□□ -0.02
CD40P25942 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.9□□□□□ -0.02
CD40P25942 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.9□□□□□ -0.02
CD40P25942 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.9□□□□□ -0.02
CD40P25942 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
CD40P25942 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.9□□□□□ -0.02
CD40P25942 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CD40P25942 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CD40P25942 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.9□□□□□ -0.02
CD40P25942 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CD40P25942 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CD40P25942 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD40P25942 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.9□□□□□ -0.02
CD40P25942 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CD40P25942 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CD40P25942 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.89□□□□□ -0.03
CD40P25942 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 KRT18P2-201ENST00000447938 1258 ntBASIC14.89□□□□□ -0.03
CD40P25942 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.89□□□□□ -0.03
CD40P25942 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.89□□□□□ -0.03
CD40P25942 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.89□□□□□ -0.03
CD40P25942 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.89□□□□□ -0.03
CD40P25942 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.89□□□□□ -0.03
CD40P25942 AC002347.1-201ENST00000569543 541 ntBASIC14.89□□□□□ -0.03
CD40P25942 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.89□□□□□ -0.03
CD40P25942 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.89□□□□□ -0.03
CD40P25942 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.89□□□□□ -0.03
CD40P25942 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.89□□□□□ -0.03
CD40P25942 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD40P25942 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CD40P25942 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD40P25942 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.89□□□□□ -0.03
CD40P25942 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.89□□□□□ -0.03
CD40P25942 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.89□□□□□ -0.03
CD40P25942 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD40P25942 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.88□□□□□ -0.03
CD40P25942 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD40P25942 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.88□□□□□ -0.03
CD40P25942 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CD40P25942 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CD40P25942 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD40P25942 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD40P25942 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.88□□□□□ -0.03
CD40P25942 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
CD40P25942 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CD40P25942 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.88□□□□□ -0.03
CD40P25942 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.88□□□□□ -0.03
CD40P25942 MIR1233-2-201ENST00000408138 82 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms