Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.85■□□□□ 0.61
RFX1P22670 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.85■□□□□ 0.61
RFX1P22670 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX1P22670 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
RFX1P22670 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.85■□□□□ 0.61
RFX1P22670 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 AL049757.1-201ENST00000616842 1596 ntBASIC18.85■□□□□ 0.61
RFX1P22670 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX1P22670 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX1P22670 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.84■□□□□ 0.61
RFX1P22670 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX1P22670 AC243591.1-201ENST00000452967 1364 ntBASIC18.84■□□□□ 0.61
RFX1P22670 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RFX1P22670 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX1P22670 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.84■□□□□ 0.61
RFX1P22670 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.84■□□□□ 0.61
RFX1P22670 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.84■□□□□ 0.61
RFX1P22670 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RFX1P22670 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.84■□□□□ 0.61
RFX1P22670 AP005901.3-202ENST00000581653 237 ntBASIC18.84■□□□□ 0.61
RFX1P22670 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX1P22670 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 AC148477.8-201ENST00000624298 468 ntBASIC18.84■□□□□ 0.61
RFX1P22670 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX1P22670 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX1P22670 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX1P22670 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RFX1P22670 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFX1P22670 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFX1P22670 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFX1P22670 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFX1P22670 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.83■□□□□ 0.61
RFX1P22670 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RFX1P22670 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFX1P22670 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.83■□□□□ 0.6
RFX1P22670 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFX1P22670 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.83■□□□□ 0.6
RFX1P22670 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RFX1P22670 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFX1P22670 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFX1P22670 MIR5100-201ENST00000579544 119 ntBASIC18.83■□□□□ 0.6
RFX1P22670 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.83■□□□□ 0.6
RFX1P22670 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RFX1P22670 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFX1P22670 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFX1P22670 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.83■□□□□ 0.6
RFX1P22670 AC046185.3-201ENST00000623228 1824 ntBASIC18.83■□□□□ 0.6
RFX1P22670 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFX1P22670 AL353593.2-201ENST00000602529 1483 ntBASIC18.83■□□□□ 0.6
RFX1P22670 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RFX1P22670 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.82■□□□□ 0.6
RFX1P22670 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RFX1P22670 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RFX1P22670 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFX1P22670 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.82■□□□□ 0.6
RFX1P22670 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RFX1P22670 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFX1P22670 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms