Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.96■□□□□ 0.95
KCNA3P22001 AC007541.1-201ENST00000570282 1469 ntBASIC20.96■□□□□ 0.95
KCNA3P22001 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.96■□□□□ 0.95
KCNA3P22001 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
KCNA3P22001 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KCNA3P22001 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
KCNA3P22001 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNA3P22001 MIR1909-201ENST00000411312 80 ntBASIC20.96■□□□□ 0.95
KCNA3P22001 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNA3P22001 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.96■□□□□ 0.95
KCNA3P22001 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.96■□□□□ 0.95
KCNA3P22001 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
KCNA3P22001 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KCNA3P22001 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
KCNA3P22001 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.96■□□□□ 0.95
KCNA3P22001 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
KCNA3P22001 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.96■□□□□ 0.95
KCNA3P22001 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNA3P22001 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KCNA3P22001 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KCNA3P22001 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.96■□□□□ 0.95
KCNA3P22001 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNA3P22001 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNA3P22001 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNA3P22001 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNA3P22001 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.95■□□□□ 0.94
KCNA3P22001 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.95■□□□□ 0.94
KCNA3P22001 RNU1-129P-201ENST00000384064 167 ntBASIC20.95■□□□□ 0.94
KCNA3P22001 DGCR5-201ENST00000399539 862 ntBASIC20.95■□□□□ 0.94
KCNA3P22001 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.95■□□□□ 0.94
KCNA3P22001 AC142381.1-201ENST00000426099 345 ntBASIC20.95■□□□□ 0.94
KCNA3P22001 AL353779.1-201ENST00000434793 351 ntBASIC20.95■□□□□ 0.94
KCNA3P22001 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KCNA3P22001 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNA3P22001 HLA-V-204ENST00000476601 1289 ntBASIC20.95■□□□□ 0.94
KCNA3P22001 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
KCNA3P22001 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.95■□□□□ 0.94
KCNA3P22001 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.95■□□□□ 0.94
KCNA3P22001 RARRES2P9-201ENST00000565168 469 ntBASIC20.95■□□□□ 0.94
KCNA3P22001 U1.21-201ENST00000580816 167 ntBASIC20.95■□□□□ 0.94
KCNA3P22001 AL132655.2-201ENST00000596276 594 ntBASIC20.95■□□□□ 0.94
KCNA3P22001 AC017083.2-201ENST00000608069 979 ntBASIC20.95■□□□□ 0.94
KCNA3P22001 AC007967.4-201ENST00000614700 386 ntBASIC20.95■□□□□ 0.94
KCNA3P22001 AL162274.1-201ENST00000617191 1098 ntBASIC20.95■□□□□ 0.94
KCNA3P22001 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
KCNA3P22001 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNA3P22001 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.95■□□□□ 0.94
KCNA3P22001 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNA3P22001 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNA3P22001 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 AP3S2-216ENST00000617003 1561 ntBASIC20.94■□□□□ 0.94
KCNA3P22001 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.94■□□□□ 0.94
KCNA3P22001 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.94■□□□□ 0.94
KCNA3P22001 INE1-201ENST00000456273 945 ntBASIC20.94■□□□□ 0.94
KCNA3P22001 ACA64.2-201ENST00000459014 129 ntBASIC20.94■□□□□ 0.94
KCNA3P22001 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.94■□□□□ 0.94
KCNA3P22001 AL139327.4-201ENST00000612362 153 ntBASIC20.94■□□□□ 0.94
KCNA3P22001 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.94■□□□□ 0.94
KCNA3P22001 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.94■□□□□ 0.94
KCNA3P22001 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.94■□□□□ 0.94
KCNA3P22001 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.94■□□□□ 0.94
KCNA3P22001 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNA3P22001 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
KCNA3P22001 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.94■□□□□ 0.94
KCNA3P22001 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.93■□□□□ 0.94
KCNA3P22001 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
KCNA3P22001 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 AC098614.1-201ENST00000368528 745 ntBASIC20.93■□□□□ 0.94
KCNA3P22001 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNA3P22001 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNA3P22001 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.93■□□□□ 0.94
KCNA3P22001 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNA3P22001 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNA3P22001 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
KCNA3P22001 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms