Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.45■□□□□ 0.38
VCLP18206 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.45■□□□□ 0.38
VCLP18206 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.45■□□□□ 0.38
VCLP18206 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
VCLP18206 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.45■□□□□ 0.38
VCLP18206 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.45■□□□□ 0.38
VCLP18206 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.45■□□□□ 0.38
VCLP18206 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.45■□□□□ 0.38
VCLP18206 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.45■□□□□ 0.38
VCLP18206 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
VCLP18206 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VCLP18206 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.45■□□□□ 0.38
VCLP18206 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VCLP18206 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VCLP18206 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.44■□□□□ 0.38
VCLP18206 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
VCLP18206 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
VCLP18206 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
VCLP18206 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VCLP18206 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.44■□□□□ 0.38
VCLP18206 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.44■□□□□ 0.38
VCLP18206 RCN1P2-201ENST00000398357 915 ntBASIC17.44■□□□□ 0.38
VCLP18206 DDX43P3-201ENST00000441064 443 ntBASIC17.44■□□□□ 0.38
VCLP18206 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.44■□□□□ 0.38
VCLP18206 FAAHP1-202ENST00000446499 1238 ntBASIC17.44■□□□□ 0.38
VCLP18206 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.44■□□□□ 0.38
VCLP18206 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.44■□□□□ 0.38
VCLP18206 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.44■□□□□ 0.38
VCLP18206 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.44■□□□□ 0.38
VCLP18206 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VCLP18206 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.44■□□□□ 0.38
VCLP18206 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.44■□□□□ 0.38
VCLP18206 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCLP18206 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.44■□□□□ 0.38
VCLP18206 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.44■□□□□ 0.38
VCLP18206 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.44■□□□□ 0.38
VCLP18206 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.44■□□□□ 0.38
VCLP18206 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.43■□□□□ 0.38
VCLP18206 AL023806.1-201ENST00000603994 1649 ntBASIC17.43■□□□□ 0.38
VCLP18206 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VCLP18206 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.43■□□□□ 0.38
VCLP18206 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VCLP18206 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.43■□□□□ 0.38
VCLP18206 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VCLP18206 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.43■□□□□ 0.38
VCLP18206 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.43■□□□□ 0.38
VCLP18206 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.43■□□□□ 0.38
VCLP18206 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.43■□□□□ 0.38
VCLP18206 AC007967.3-201ENST00000434308 558 ntBASIC17.43■□□□□ 0.38
VCLP18206 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.43■□□□□ 0.38
VCLP18206 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
VCLP18206 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.43■□□□□ 0.38
VCLP18206 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.43■□□□□ 0.38
VCLP18206 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
VCLP18206 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.43■□□□□ 0.38
VCLP18206 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.43■□□□□ 0.38
VCLP18206 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
VCLP18206 UBALD1-205ENST00000590891 2641 ntBASIC17.43■□□□□ 0.38
VCLP18206 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCLP18206 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms