Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
COL11A1P12107 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL11A1P12107 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL11A1P12107 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL11A1P12107 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COL11A1P12107 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL11A1P12107 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
COL11A1P12107 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.43■□□□□ 0.7
COL11A1P12107 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL11A1P12107 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL11A1P12107 AC093525.9-201ENST00000624961 1746 ntBASIC19.43■□□□□ 0.7
COL11A1P12107 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL11A1P12107 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.43■□□□□ 0.7
COL11A1P12107 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.43■□□□□ 0.7
COL11A1P12107 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL11A1P12107 AC069262.1-201ENST00000539058 672 ntBASIC19.43■□□□□ 0.7
COL11A1P12107 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.43■□□□□ 0.7
COL11A1P12107 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL11A1P12107 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COL11A1P12107 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.43■□□□□ 0.7
COL11A1P12107 FRMD8P1-201ENST00000440433 1524 ntBASIC19.43■□□□□ 0.7
COL11A1P12107 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.43■□□□□ 0.7
COL11A1P12107 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
COL11A1P12107 GNAS-203ENST00000306120 1878 ntBASIC19.43■□□□□ 0.7
COL11A1P12107 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.42■□□□□ 0.7
COL11A1P12107 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
COL11A1P12107 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.42■□□□□ 0.7
COL11A1P12107 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.42■□□□□ 0.7
COL11A1P12107 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
COL11A1P12107 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.42■□□□□ 0.7
COL11A1P12107 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.42■□□□□ 0.7
COL11A1P12107 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.42■□□□□ 0.7
COL11A1P12107 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL11A1P12107 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.42■□□□□ 0.7
COL11A1P12107 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
COL11A1P12107 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL11A1P12107 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.41■□□□□ 0.7
COL11A1P12107 FAM86C2P-203ENST00000528684 1004 ntBASIC19.41■□□□□ 0.7
COL11A1P12107 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.41■□□□□ 0.7
COL11A1P12107 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.41■□□□□ 0.7
COL11A1P12107 AC015911.4-201ENST00000588022 1070 ntBASIC19.41■□□□□ 0.7
COL11A1P12107 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL11A1P12107 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL11A1P12107 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL11A1P12107 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.41■□□□□ 0.7
COL11A1P12107 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL11A1P12107 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.41■□□□□ 0.7
COL11A1P12107 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL11A1P12107 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.41■□□□□ 0.7
COL11A1P12107 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL11A1P12107 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.41■□□□□ 0.7
COL11A1P12107 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.41■□□□□ 0.7
COL11A1P12107 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL11A1P12107 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL11A1P12107 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.41■□□□□ 0.7
COL11A1P12107 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL11A1P12107 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL11A1P12107 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.41■□□□□ 0.7
COL11A1P12107 SPDYE14P-201ENST00000442619 822 ntBASIC19.41■□□□□ 0.7
COL11A1P12107 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.41■□□□□ 0.7
COL11A1P12107 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
COL11A1P12107 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.41■□□□□ 0.7
COL11A1P12107 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
COL11A1P12107 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.41■□□□□ 0.7
COL11A1P12107 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.41■□□□□ 0.7
COL11A1P12107 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL11A1P12107 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.4■□□□□ 0.7
COL11A1P12107 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL11A1P12107 FOXO1B-201ENST00000504678 1527 ntBASIC19.4■□□□□ 0.7
COL11A1P12107 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.4■□□□□ 0.7
COL11A1P12107 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL11A1P12107 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL11A1P12107 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.4■□□□□ 0.7
COL11A1P12107 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL11A1P12107 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.4■□□□□ 0.7
COL11A1P12107 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.4■□□□□ 0.7
COL11A1P12107 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.4■□□□□ 0.7
COL11A1P12107 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.4■□□□□ 0.7
COL11A1P12107 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL11A1P12107 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL11A1P12107 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms