Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
SP9P0CG40 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SP9P0CG40 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP9P0CG40 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP9P0CG40 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
SP9P0CG40 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SP9P0CG40 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.84■□□□□ 0.29
SP9P0CG40 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.84■□□□□ 0.29
SP9P0CG40 AC022210.1-201ENST00000449856 793 ntBASIC16.84■□□□□ 0.29
SP9P0CG40 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SP9P0CG40 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.84■□□□□ 0.29
SP9P0CG40 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.84■□□□□ 0.29
SP9P0CG40 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.84■□□□□ 0.29
SP9P0CG40 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.84■□□□□ 0.29
SP9P0CG40 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.84■□□□□ 0.29
SP9P0CG40 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.84■□□□□ 0.29
SP9P0CG40 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.84■□□□□ 0.29
SP9P0CG40 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SP9P0CG40 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SP9P0CG40 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.84■□□□□ 0.29
SP9P0CG40 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SP9P0CG40 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP9P0CG40 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SP9P0CG40 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP9P0CG40 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP9P0CG40 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP9P0CG40 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP9P0CG40 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SP9P0CG40 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SP9P0CG40 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SP9P0CG40 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP9P0CG40 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SP9P0CG40 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP9P0CG40 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SP9P0CG40 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP9P0CG40 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP9P0CG40 HCG4-201ENST00000418983 998 ntBASIC16.83■□□□□ 0.28
SP9P0CG40 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.83■□□□□ 0.28
SP9P0CG40 AC142381.1-201ENST00000426099 345 ntBASIC16.83■□□□□ 0.28
SP9P0CG40 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.83■□□□□ 0.28
SP9P0CG40 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SP9P0CG40 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.83■□□□□ 0.28
SP9P0CG40 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SP9P0CG40 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SP9P0CG40 AL020996.1-203ENST00000536896 2307 ntBASIC16.83■□□□□ 0.28
SP9P0CG40 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.83■□□□□ 0.28
SP9P0CG40 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.83■□□□□ 0.28
SP9P0CG40 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.83■□□□□ 0.28
SP9P0CG40 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SP9P0CG40 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.83■□□□□ 0.28
SP9P0CG40 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.83■□□□□ 0.28
SP9P0CG40 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.83■□□□□ 0.28
SP9P0CG40 AC004840.1-201ENST00000636359 365 ntBASIC16.83■□□□□ 0.28
SP9P0CG40 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SP9P0CG40 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.83■□□□□ 0.28
SP9P0CG40 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.82■□□□□ 0.28
SP9P0CG40 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SP9P0CG40 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SP9P0CG40 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.82■□□□□ 0.28
SP9P0CG40 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SP9P0CG40 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 AC087499.6-201ENST00000411576 835 ntBASIC16.82■□□□□ 0.28
SP9P0CG40 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 DFFBP1-201ENST00000433250 979 ntBASIC16.82■□□□□ 0.28
SP9P0CG40 GNAQP1-201ENST00000444815 1067 ntBASIC16.82■□□□□ 0.28
SP9P0CG40 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SP9P0CG40 MIR3909-201ENST00000579518 119 ntBASIC16.82■□□□□ 0.28
SP9P0CG40 AL844908.2-201ENST00000609461 460 ntBASIC16.82■□□□□ 0.28
SP9P0CG40 TEX28P1-201ENST00000613479 1221 ntBASIC16.82■□□□□ 0.28
SP9P0CG40 TEX28P2-201ENST00000617764 1221 ntBASIC16.82■□□□□ 0.28
SP9P0CG40 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.82■□□□□ 0.28
SP9P0CG40 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP9P0CG40 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SP9P0CG40 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms