Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40ALP0C0E4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 PTCHD3P3-201ENST00000403073 906 ntBASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 SLC25A6P5-201ENST00000435663 894 ntBASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 AC004967.1-201ENST00000453589 447 ntBASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40ALP0C0E4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 AP001160.2-201ENST00000596071 487 ntBASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40ALP0C0E4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 AC134684.3-201ENST00000641758 218 ntBASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB40ALP0C0E4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms