Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRPRAP08240 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SRPRAP08240 GNAS-203ENST00000306120 1878 ntBASIC17.42■□□□□ 0.38
SRPRAP08240 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.42■□□□□ 0.38
SRPRAP08240 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRPRAP08240 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRPRAP08240 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRPRAP08240 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.42■□□□□ 0.38
SRPRAP08240 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.42■□□□□ 0.38
SRPRAP08240 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SRPRAP08240 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.42■□□□□ 0.38
SRPRAP08240 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.42■□□□□ 0.38
SRPRAP08240 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.42■□□□□ 0.38
SRPRAP08240 AC112482.1-201ENST00000492080 688 ntBASIC17.42■□□□□ 0.38
SRPRAP08240 CXCL1P1-201ENST00000502804 216 ntBASIC17.42■□□□□ 0.38
SRPRAP08240 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRPRAP08240 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SRPRAP08240 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.42■□□□□ 0.38
SRPRAP08240 AC007064.4-201ENST00000637740 555 ntBASIC17.42■□□□□ 0.38
SRPRAP08240 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
SRPRAP08240 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRPRAP08240 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRPRAP08240 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRPRAP08240 AC068880.1-201ENST00000507289 2297 ntBASIC17.42■□□□□ 0.38
SRPRAP08240 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRPRAP08240 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRPRAP08240 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.42■□□□□ 0.38
SRPRAP08240 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.42■□□□□ 0.38
SRPRAP08240 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SRPRAP08240 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.42■□□□□ 0.38
SRPRAP08240 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.41■□□□□ 0.38
SRPRAP08240 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.41■□□□□ 0.38
SRPRAP08240 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.41■□□□□ 0.38
SRPRAP08240 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.41■□□□□ 0.38
SRPRAP08240 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.41■□□□□ 0.38
SRPRAP08240 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 AC087163.2-201ENST00000457299 853 ntBASIC17.41■□□□□ 0.38
SRPRAP08240 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.41■□□□□ 0.38
SRPRAP08240 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.41■□□□□ 0.38
SRPRAP08240 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.41■□□□□ 0.38
SRPRAP08240 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.41■□□□□ 0.38
SRPRAP08240 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.41■□□□□ 0.38
SRPRAP08240 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.41■□□□□ 0.38
SRPRAP08240 AC004877.2-201ENST00000623941 599 ntBASIC17.41■□□□□ 0.38
SRPRAP08240 AC092865.6-201ENST00000642101 219 ntBASIC17.41■□□□□ 0.38
SRPRAP08240 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.41■□□□□ 0.38
SRPRAP08240 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SRPRAP08240 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRPRAP08240 AC129492.6-201ENST00000611383 1305 ntBASIC17.41■□□□□ 0.38
SRPRAP08240 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.41■□□□□ 0.38
SRPRAP08240 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SRPRAP08240 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SRPRAP08240 AL138688.1-201ENST00000624851 1594 ntBASIC17.4■□□□□ 0.38
SRPRAP08240 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SRPRAP08240 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 AC018470.1-201ENST00000624790 3129 ntBASIC17.4■□□□□ 0.38
SRPRAP08240 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SRPRAP08240 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.4■□□□□ 0.38
SRPRAP08240 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SRPRAP08240 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.4■□□□□ 0.38
SRPRAP08240 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.4■□□□□ 0.38
SRPRAP08240 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 AC023141.13-201ENST00000604991 943 ntBASIC17.4■□□□□ 0.38
SRPRAP08240 AL513190.1-201ENST00000621254 727 ntBASIC17.4■□□□□ 0.38
SRPRAP08240 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.4■□□□□ 0.38
SRPRAP08240 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRPRAP08240 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SRPRAP08240 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SRPRAP08240 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SRPRAP08240 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPRAP08240 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.39■□□□□ 0.37
SRPRAP08240 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPRAP08240 AC134043.2-201ENST00000624206 2238 ntBASIC17.39■□□□□ 0.37
SRPRAP08240 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms