Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
MT-ND1P03886 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.38■□□□□ 0.21
MT-ND1P03886 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
MT-ND1P03886 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-ND1P03886 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
MT-ND1P03886 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MT-ND1P03886 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-ND1P03886 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MT-ND1P03886 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-ND1P03886 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 AC092068.3-201ENST00000587894 2016 ntBASIC16.37■□□□□ 0.21
MT-ND1P03886 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-ND1P03886 AC093827.2-201ENST00000512654 315 ntBASIC16.37■□□□□ 0.21
MT-ND1P03886 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-ND1P03886 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.37■□□□□ 0.21
MT-ND1P03886 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
MT-ND1P03886 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MT-ND1P03886 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
MT-ND1P03886 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-ND1P03886 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
MT-ND1P03886 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
MT-ND1P03886 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
MT-ND1P03886 PAUPAR-201ENST00000630360 2965 ntBASIC16.37■□□□□ 0.21
MT-ND1P03886 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
MT-ND1P03886 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-ND1P03886 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
MT-ND1P03886 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
MT-ND1P03886 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-ND1P03886 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-ND1P03886 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
MT-ND1P03886 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.36■□□□□ 0.21
MT-ND1P03886 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND1P03886 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
MT-ND1P03886 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND1P03886 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MT-ND1P03886 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
MT-ND1P03886 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 SLC25A1P3-201ENST00000395415 828 ntBASIC16.36■□□□□ 0.21
MT-ND1P03886 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.36■□□□□ 0.21
MT-ND1P03886 KRT18P65-201ENST00000439811 1286 ntBASIC16.36■□□□□ 0.21
MT-ND1P03886 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND1P03886 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.36■□□□□ 0.21
MT-ND1P03886 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.36■□□□□ 0.21
MT-ND1P03886 AC145285.6-201ENST00000604632 637 ntBASIC16.36■□□□□ 0.21
MT-ND1P03886 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MT-ND1P03886 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
MT-ND1P03886 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.36■□□□□ 0.21
MT-ND1P03886 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND1P03886 AL391005.1-201ENST00000623953 2435 ntBASIC16.36■□□□□ 0.21
MT-ND1P03886 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.36■□□□□ 0.21
MT-ND1P03886 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND1P03886 TSPY26P-202ENST00000565928 3884 ntBASIC16.36■□□□□ 0.21
MT-ND1P03886 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-ND1P03886 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-ND1P03886 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
MT-ND1P03886 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
MT-ND1P03886 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MT-ND1P03886 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.35■□□□□ 0.21
MT-ND1P03886 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MT-ND1P03886 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.35■□□□□ 0.21
MT-ND1P03886 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.35■□□□□ 0.21
MT-ND1P03886 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.35■□□□□ 0.21
MT-ND1P03886 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms