Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.12■□□□□ 0.49
LMNAP02545 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.12■□□□□ 0.49
LMNAP02545 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.12■□□□□ 0.49
LMNAP02545 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.12■□□□□ 0.49
LMNAP02545 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
LMNAP02545 MIR4469-201ENST00000583919 79 ntBASIC18.12■□□□□ 0.49
LMNAP02545 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LMNAP02545 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.12■□□□□ 0.49
LMNAP02545 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.12■□□□□ 0.49
LMNAP02545 AC108860.2-201ENST00000562760 2183 ntBASIC18.12■□□□□ 0.49
LMNAP02545 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.12■□□□□ 0.49
LMNAP02545 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.12■□□□□ 0.49
LMNAP02545 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.12■□□□□ 0.49
LMNAP02545 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LMNAP02545 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.12■□□□□ 0.49
LMNAP02545 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LMNAP02545 INTS4P1-201ENST00000438455 1935 ntBASIC18.11■□□□□ 0.49
LMNAP02545 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.11■□□□□ 0.49
LMNAP02545 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.11■□□□□ 0.49
LMNAP02545 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.11■□□□□ 0.49
LMNAP02545 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.11■□□□□ 0.49
LMNAP02545 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.11■□□□□ 0.49
LMNAP02545 CNN2P11-201ENST00000429351 262 ntBASIC18.11■□□□□ 0.49
LMNAP02545 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.11■□□□□ 0.49
LMNAP02545 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LMNAP02545 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LMNAP02545 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.11■□□□□ 0.49
LMNAP02545 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.11■□□□□ 0.49
LMNAP02545 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.11■□□□□ 0.49
LMNAP02545 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.11■□□□□ 0.49
LMNAP02545 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.11■□□□□ 0.49
LMNAP02545 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.11■□□□□ 0.49
LMNAP02545 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.11■□□□□ 0.49
LMNAP02545 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.11■□□□□ 0.49
LMNAP02545 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMNAP02545 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LMNAP02545 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
LMNAP02545 AC135776.1-201ENST00000319817 2481 ntBASIC18.1■□□□□ 0.49
LMNAP02545 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.1■□□□□ 0.49
LMNAP02545 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.1■□□□□ 0.49
LMNAP02545 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.1■□□□□ 0.49
LMNAP02545 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.1■□□□□ 0.49
LMNAP02545 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LMNAP02545 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LMNAP02545 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LMNAP02545 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LMNAP02545 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LMNAP02545 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.1■□□□□ 0.49
LMNAP02545 AC009947.1-201ENST00000444350 727 ntBASIC18.1■□□□□ 0.49
LMNAP02545 ABCD1P5-201ENST00000445663 754 ntBASIC18.1■□□□□ 0.49
LMNAP02545 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.1■□□□□ 0.49
LMNAP02545 PAWRP1-201ENST00000451083 565 ntBASIC18.1■□□□□ 0.49
LMNAP02545 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LMNAP02545 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LMNAP02545 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LMNAP02545 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.1■□□□□ 0.49
LMNAP02545 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LMNAP02545 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LMNAP02545 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LMNAP02545 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LMNAP02545 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LMNAP02545 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LMNAP02545 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LMNAP02545 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LMNAP02545 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LMNAP02545 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.09■□□□□ 0.49
LMNAP02545 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LMNAP02545 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LMNAP02545 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms