Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PRAMEF4O60810 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF4O60810 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF4O60810 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF4O60810 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF4O60810 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF4O60810 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEF4O60810 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 NKAPP1-205ENST00000585790 367 ntBASIC16.63■□□□□ 0.25
PRAMEF4O60810 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 AC097637.2-201ENST00000624096 1997 ntBASIC16.63■□□□□ 0.25
PRAMEF4O60810 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 FRMD8P1-201ENST00000440433 1524 ntBASIC16.63■□□□□ 0.25
PRAMEF4O60810 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF4O60810 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF4O60810 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 AC090340.1-201ENST00000620778 4980 ntBASIC16.62■□□□□ 0.25
PRAMEF4O60810 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 UNC93B7-201ENST00000509439 705 ntBASIC16.62■□□□□ 0.25
PRAMEF4O60810 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 AL121772.3-201ENST00000610840 674 ntBASIC16.62■□□□□ 0.25
PRAMEF4O60810 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PRAMEF4O60810 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF4O60810 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 LINC00982-205ENST00000420957 435 ntBASIC16.61■□□□□ 0.25
PRAMEF4O60810 ACTG1P4-201ENST00000425123 1122 ntBASIC16.61■□□□□ 0.25
PRAMEF4O60810 PRYP5-201ENST00000451909 266 ntBASIC16.61■□□□□ 0.25
PRAMEF4O60810 FGFR3P6-201ENST00000457012 610 ntBASIC16.61■□□□□ 0.25
PRAMEF4O60810 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 AC091304.2-201ENST00000564639 760 ntBASIC16.61■□□□□ 0.25
PRAMEF4O60810 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 PRELID1P1-202ENST00000567272 903 ntBASIC16.61■□□□□ 0.25
PRAMEF4O60810 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 MTDHP3-201ENST00000594186 672 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms