Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LCMT2O60294 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.55■□□□□ 0.24
LCMT2O60294 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.55■□□□□ 0.24
LCMT2O60294 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LCMT2O60294 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.55■□□□□ 0.24
LCMT2O60294 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.55■□□□□ 0.24
LCMT2O60294 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.55■□□□□ 0.24
LCMT2O60294 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LCMT2O60294 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LCMT2O60294 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
LCMT2O60294 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LCMT2O60294 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LCMT2O60294 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.54■□□□□ 0.24
LCMT2O60294 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.54■□□□□ 0.24
LCMT2O60294 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LCMT2O60294 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LCMT2O60294 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.54■□□□□ 0.24
LCMT2O60294 MRPL3P1-201ENST00000400109 1033 ntBASIC16.54■□□□□ 0.24
LCMT2O60294 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 AC018712.1-201ENST00000455767 687 ntBASIC16.54■□□□□ 0.24
LCMT2O60294 AC009078.2-202ENST00000463353 338 ntBASIC16.54■□□□□ 0.24
LCMT2O60294 AC073648.2-201ENST00000510116 352 ntBASIC16.54■□□□□ 0.24
LCMT2O60294 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.54■□□□□ 0.24
LCMT2O60294 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.54■□□□□ 0.24
LCMT2O60294 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LCMT2O60294 AL589182.2-201ENST00000619332 1049 ntBASIC16.54■□□□□ 0.24
LCMT2O60294 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.54■□□□□ 0.24
LCMT2O60294 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LCMT2O60294 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.54■□□□□ 0.24
LCMT2O60294 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LCMT2O60294 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LCMT2O60294 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 AP001094.4-201ENST00000579008 2176 ntBASIC16.54■□□□□ 0.24
LCMT2O60294 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LCMT2O60294 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LCMT2O60294 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LCMT2O60294 NCF1C-201ENST00000438382 1427 ntBASIC16.53■□□□□ 0.24
LCMT2O60294 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.53■□□□□ 0.24
LCMT2O60294 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LCMT2O60294 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.53■□□□□ 0.24
LCMT2O60294 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.53■□□□□ 0.24
LCMT2O60294 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.53■□□□□ 0.24
LCMT2O60294 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LCMT2O60294 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
LCMT2O60294 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
LCMT2O60294 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.53■□□□□ 0.24
LCMT2O60294 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.53■□□□□ 0.24
LCMT2O60294 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.53■□□□□ 0.24
LCMT2O60294 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.53■□□□□ 0.24
LCMT2O60294 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.53■□□□□ 0.24
LCMT2O60294 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.53■□□□□ 0.24
LCMT2O60294 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.53■□□□□ 0.24
LCMT2O60294 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.53■□□□□ 0.24
LCMT2O60294 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.53■□□□□ 0.24
LCMT2O60294 KRT18P67-201ENST00000432816 1264 ntBASIC16.53■□□□□ 0.24
LCMT2O60294 AC139887.3-201ENST00000568585 713 ntBASIC16.53■□□□□ 0.24
LCMT2O60294 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.53■□□□□ 0.24
LCMT2O60294 AL353135.1-201ENST00000606729 504 ntBASIC16.53■□□□□ 0.24
LCMT2O60294 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.53■□□□□ 0.24
LCMT2O60294 AC107918.4-202ENST00000641623 219 ntBASIC16.53■□□□□ 0.24
LCMT2O60294 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.53■□□□□ 0.24
LCMT2O60294 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
LCMT2O60294 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LCMT2O60294 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms