Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.74■□□□□ 0.59
EXTL3O43909 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
EXTL3O43909 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.74■□□□□ 0.59
EXTL3O43909 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.74■□□□□ 0.59
EXTL3O43909 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.74■□□□□ 0.59
EXTL3O43909 ELK2BP-201ENST00000415014 1224 ntBASIC18.74■□□□□ 0.59
EXTL3O43909 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.74■□□□□ 0.59
EXTL3O43909 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.74■□□□□ 0.59
EXTL3O43909 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.74■□□□□ 0.59
EXTL3O43909 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.74■□□□□ 0.59
EXTL3O43909 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
EXTL3O43909 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.74■□□□□ 0.59
EXTL3O43909 AC120114.3-201ENST00000611923 658 ntBASIC18.74■□□□□ 0.59
EXTL3O43909 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.74■□□□□ 0.59
EXTL3O43909 MIR7706-201ENST00000613747 67 ntBASIC18.74■□□□□ 0.59
EXTL3O43909 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.74■□□□□ 0.59
EXTL3O43909 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.74■□□□□ 0.59
EXTL3O43909 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.74■□□□□ 0.59
EXTL3O43909 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.74■□□□□ 0.59
EXTL3O43909 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
EXTL3O43909 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.74■□□□□ 0.59
EXTL3O43909 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
EXTL3O43909 LINC02012-201ENST00000608206 1725 ntBASIC18.74■□□□□ 0.59
EXTL3O43909 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXTL3O43909 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
EXTL3O43909 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
EXTL3O43909 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
EXTL3O43909 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.73■□□□□ 0.59
EXTL3O43909 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.73■□□□□ 0.59
EXTL3O43909 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.73■□□□□ 0.59
EXTL3O43909 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.73■□□□□ 0.59
EXTL3O43909 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.73■□□□□ 0.59
EXTL3O43909 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.73■□□□□ 0.59
EXTL3O43909 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.73■□□□□ 0.59
EXTL3O43909 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
EXTL3O43909 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.73■□□□□ 0.59
EXTL3O43909 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
EXTL3O43909 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
EXTL3O43909 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXTL3O43909 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.73■□□□□ 0.59
EXTL3O43909 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
EXTL3O43909 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EXTL3O43909 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.72■□□□□ 0.59
EXTL3O43909 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EXTL3O43909 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.72■□□□□ 0.59
EXTL3O43909 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EXTL3O43909 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
EXTL3O43909 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
EXTL3O43909 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.72■□□□□ 0.59
EXTL3O43909 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EXTL3O43909 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EXTL3O43909 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EXTL3O43909 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.72■□□□□ 0.59
EXTL3O43909 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.72■□□□□ 0.59
EXTL3O43909 AC093909.1-201ENST00000504731 1122 ntBASIC18.72■□□□□ 0.59
EXTL3O43909 AC136632.2-201ENST00000512891 861 ntBASIC18.72■□□□□ 0.59
EXTL3O43909 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.72■□□□□ 0.59
EXTL3O43909 AL671883.3-201ENST00000603274 991 ntBASIC18.72■□□□□ 0.59
EXTL3O43909 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EXTL3O43909 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EXTL3O43909 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
EXTL3O43909 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
EXTL3O43909 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
EXTL3O43909 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.72■□□□□ 0.59
EXTL3O43909 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 AP002414.3-201ENST00000589352 1468 ntBASIC18.71■□□□□ 0.59
EXTL3O43909 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EXTL3O43909 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms