Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 MIR3180-3-201ENST00000584616 94 ntBASIC12.41□□□□□ -0.42
PAX4O43316 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
PAX4O43316 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.41□□□□□ -0.42
PAX4O43316 AC005336.2-201ENST00000593183 939 ntBASIC12.41□□□□□ -0.42
PAX4O43316 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
PAX4O43316 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.41□□□□□ -0.42
PAX4O43316 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PAX4O43316 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PAX4O43316 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.41□□□□□ -0.42
PAX4O43316 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PAX4O43316 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
PAX4O43316 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PAX4O43316 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PAX4O43316 AC139713.2-201ENST00000641328 2723 ntBASIC12.41□□□□□ -0.42
PAX4O43316 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
PAX4O43316 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PAX4O43316 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
PAX4O43316 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PAX4O43316 AC133963.1-201ENST00000504166 1679 ntBASIC12.41□□□□□ -0.42
PAX4O43316 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PAX4O43316 NSUN5P1-202ENST00000421140 1535 ntBASIC12.41□□□□□ -0.42
PAX4O43316 NSUN5P2-203ENST00000457352 1529 ntBASIC12.41□□□□□ -0.42
PAX4O43316 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PAX4O43316 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PAX4O43316 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.41□□□□□ -0.42
PAX4O43316 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
PAX4O43316 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PAX4O43316 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.41□□□□□ -0.42
PAX4O43316 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.41□□□□□ -0.42
PAX4O43316 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.4□□□□□ -0.42
PAX4O43316 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.4□□□□□ -0.42
PAX4O43316 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.4□□□□□ -0.42
PAX4O43316 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
PAX4O43316 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PAX4O43316 AC010460.3-201ENST00000511359 1579 ntBASIC12.4□□□□□ -0.42
PAX4O43316 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
PAX4O43316 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
PAX4O43316 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 AC103564.2-201ENST00000432853 1299 ntBASIC12.4□□□□□ -0.42
PAX4O43316 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.4□□□□□ -0.42
PAX4O43316 AC091607.1-201ENST00000490318 1060 ntBASIC12.4□□□□□ -0.42
PAX4O43316 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.4□□□□□ -0.42
PAX4O43316 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.4□□□□□ -0.42
PAX4O43316 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.4□□□□□ -0.42
PAX4O43316 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.4□□□□□ -0.42
PAX4O43316 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.4□□□□□ -0.42
PAX4O43316 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.4□□□□□ -0.42
PAX4O43316 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.4□□□□□ -0.42
PAX4O43316 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
PAX4O43316 AC111152.3-201ENST00000569699 673 ntBASIC12.4□□□□□ -0.42
PAX4O43316 AC099336.1-202ENST00000602961 463 ntBASIC12.4□□□□□ -0.42
PAX4O43316 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC12.4□□□□□ -0.42
PAX4O43316 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.4□□□□□ -0.42
PAX4O43316 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
PAX4O43316 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
PAX4O43316 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.4□□□□□ -0.42
PAX4O43316 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.4□□□□□ -0.42
PAX4O43316 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
PAX4O43316 HLA-J-201ENST00000462773 1622 ntBASIC12.4□□□□□ -0.42
PAX4O43316 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
PAX4O43316 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PAX4O43316 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
PAX4O43316 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
PAX4O43316 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
PAX4O43316 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.4□□□□□ -0.43
PAX4O43316 TP73-AS1-210ENST00000637775 1455 ntBASIC12.4□□□□□ -0.43
PAX4O43316 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
PAX4O43316 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PAX4O43316 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PAX4O43316 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PAX4O43316 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
PAX4O43316 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.39□□□□□ -0.43
PAX4O43316 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.39□□□□□ -0.43
PAX4O43316 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
PAX4O43316 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PAX4O43316 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms