Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SEMA3EO15041 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.71■□□□□ 0.91
SEMA3EO15041 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SEMA3EO15041 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.71■□□□□ 0.91
SEMA3EO15041 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SEMA3EO15041 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.71■□□□□ 0.91
SEMA3EO15041 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.71■□□□□ 0.91
SEMA3EO15041 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.71■□□□□ 0.91
SEMA3EO15041 AC091812.2-201ENST00000619081 385 ntBASIC20.71■□□□□ 0.91
SEMA3EO15041 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SEMA3EO15041 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SEMA3EO15041 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SEMA3EO15041 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SEMA3EO15041 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SEMA3EO15041 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA3EO15041 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
SEMA3EO15041 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SEMA3EO15041 AC116353.5-201ENST00000638148 1699 ntBASIC20.7■□□□□ 0.91
SEMA3EO15041 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3EO15041 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA3EO15041 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SEMA3EO15041 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3EO15041 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3EO15041 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA3EO15041 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA3EO15041 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3EO15041 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SEMA3EO15041 CEND1P1-201ENST00000451006 455 ntBASIC20.7■□□□□ 0.9
SEMA3EO15041 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA3EO15041 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA3EO15041 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA3EO15041 AL031432.2-201ENST00000566714 459 ntBASIC20.7■□□□□ 0.9
SEMA3EO15041 AL928711.1-201ENST00000570165 459 ntBASIC20.7■□□□□ 0.9
SEMA3EO15041 AP002472.1-201ENST00000577490 586 ntBASIC20.7■□□□□ 0.9
SEMA3EO15041 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA3EO15041 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3EO15041 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3EO15041 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA3EO15041 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3EO15041 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA3EO15041 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3EO15041 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3EO15041 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA3EO15041 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.69■□□□□ 0.9
SEMA3EO15041 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.69■□□□□ 0.9
SEMA3EO15041 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.69■□□□□ 0.9
SEMA3EO15041 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.69■□□□□ 0.9
SEMA3EO15041 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.69■□□□□ 0.9
SEMA3EO15041 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.69■□□□□ 0.9
SEMA3EO15041 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SEMA3EO15041 AC005412.3-201ENST00000580309 715 ntBASIC20.69■□□□□ 0.9
SEMA3EO15041 AC092902.6-201ENST00000641783 218 ntBASIC20.69■□□□□ 0.9
SEMA3EO15041 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.69■□□□□ 0.9
SEMA3EO15041 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 AC093525.9-201ENST00000624961 1746 ntBASIC20.69■□□□□ 0.9
SEMA3EO15041 AC068880.1-201ENST00000507289 2297 ntBASIC20.69■□□□□ 0.9
SEMA3EO15041 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SEMA3EO15041 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA3EO15041 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3EO15041 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA3EO15041 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA3EO15041 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3EO15041 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3EO15041 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.68■□□□□ 0.9
SEMA3EO15041 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SEMA3EO15041 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA3EO15041 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3EO15041 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3EO15041 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3EO15041 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.68■□□□□ 0.9
SEMA3EO15041 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.68■□□□□ 0.9
SEMA3EO15041 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA3EO15041 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.68■□□□□ 0.9
SEMA3EO15041 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.68■□□□□ 0.9
SEMA3EO15041 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SEMA3EO15041 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms