Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17■□□□□ 0.31
CDC7O00311 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 PMPCAP1-201ENST00000508114 1576 ntBASIC17■□□□□ 0.31
CDC7O00311 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17■□□□□ 0.31
CDC7O00311 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 AC012615.1-201ENST00000565797 1299 ntBASIC17■□□□□ 0.31
CDC7O00311 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 AC099336.1-202ENST00000602961 463 ntBASIC17■□□□□ 0.31
CDC7O00311 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17■□□□□ 0.31
CDC7O00311 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDC7O00311 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDC7O00311 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17■□□□□ 0.31
CDC7O00311 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17■□□□□ 0.31
CDC7O00311 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CDC7O00311 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CDC7O00311 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC7O00311 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.99■□□□□ 0.31
CDC7O00311 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDC7O00311 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDC7O00311 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.99■□□□□ 0.31
CDC7O00311 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.99■□□□□ 0.31
CDC7O00311 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.99■□□□□ 0.31
CDC7O00311 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.99■□□□□ 0.31
CDC7O00311 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDC7O00311 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDC7O00311 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.99■□□□□ 0.31
CDC7O00311 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.99■□□□□ 0.31
CDC7O00311 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.99■□□□□ 0.31
CDC7O00311 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.99■□□□□ 0.31
CDC7O00311 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.99■□□□□ 0.31
CDC7O00311 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDC7O00311 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.99■□□□□ 0.31
CDC7O00311 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
CDC7O00311 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDC7O00311 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDC7O00311 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC7O00311 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC7O00311 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDC7O00311 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDC7O00311 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.98■□□□□ 0.31
CDC7O00311 AC092068.3-201ENST00000587894 2016 ntBASIC16.98■□□□□ 0.31
CDC7O00311 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.98■□□□□ 0.31
CDC7O00311 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.98■□□□□ 0.31
CDC7O00311 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CDC7O00311 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CDC7O00311 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.98■□□□□ 0.31
CDC7O00311 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.98■□□□□ 0.31
CDC7O00311 NUS1P2-201ENST00000417358 873 ntBASIC16.98■□□□□ 0.31
CDC7O00311 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC7O00311 POM121L3P-201ENST00000419331 1163 ntBASIC16.98■□□□□ 0.31
CDC7O00311 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.98■□□□□ 0.31
CDC7O00311 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.98■□□□□ 0.31
CDC7O00311 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.98■□□□□ 0.31
CDC7O00311 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC7O00311 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDC7O00311 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.98■□□□□ 0.31
CDC7O00311 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.98■□□□□ 0.31
CDC7O00311 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.98■□□□□ 0.31
CDC7O00311 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.98■□□□□ 0.31
CDC7O00311 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.98■□□□□ 0.31
CDC7O00311 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDC7O00311 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.98■□□□□ 0.31
CDC7O00311 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.98■□□□□ 0.31
CDC7O00311 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC7O00311 AC148477.5-201ENST00000625164 1645 ntBASIC16.98■□□□□ 0.31
CDC7O00311 AC105020.1-201ENST00000435356 2205 ntBASIC16.98■□□□□ 0.31
CDC7O00311 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.98■□□□□ 0.31
CDC7O00311 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDC7O00311 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC7O00311 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CDC7O00311 EGFEM1P-202ENST00000431685 1563 ntBASIC16.98■□□□□ 0.31
CDC7O00311 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
CDC7O00311 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDC7O00311 AGGF1P2-201ENST00000426656 2106 ntBASIC16.97■□□□□ 0.31
CDC7O00311 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDC7O00311 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC7O00311 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms