Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CR769767.2-201ENST00000622735 460 ntBASIC16.53■□□□□ 0.24
PDLIM1O00151 AC141257.4-201ENST00000634557 245 ntBASIC16.53■□□□□ 0.24
PDLIM1O00151 AC136944.6-201ENST00000634818 245 ntBASIC16.53■□□□□ 0.24
PDLIM1O00151 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PDLIM1O00151 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PDLIM1O00151 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
PDLIM1O00151 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PDLIM1O00151 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.53■□□□□ 0.24
PDLIM1O00151 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 AC092171.3-201ENST00000610122 2651 ntBASIC16.53■□□□□ 0.24
PDLIM1O00151 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM1O00151 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM1O00151 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM1O00151 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
PDLIM1O00151 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM1O00151 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.52■□□□□ 0.24
PDLIM1O00151 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.52■□□□□ 0.24
PDLIM1O00151 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PDLIM1O00151 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM1O00151 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM1O00151 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM1O00151 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM1O00151 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM1O00151 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.52■□□□□ 0.24
PDLIM1O00151 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PDLIM1O00151 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.52■□□□□ 0.24
PDLIM1O00151 TMPOP1-202ENST00000424642 1267 ntBASIC16.52■□□□□ 0.24
PDLIM1O00151 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.52■□□□□ 0.24
PDLIM1O00151 ATP5G1P1-201ENST00000448724 379 ntBASIC16.52■□□□□ 0.24
PDLIM1O00151 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PDLIM1O00151 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM1O00151 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.52■□□□□ 0.24
PDLIM1O00151 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.52■□□□□ 0.24
PDLIM1O00151 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.52■□□□□ 0.24
PDLIM1O00151 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PDLIM1O00151 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.52■□□□□ 0.24
PDLIM1O00151 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.52■□□□□ 0.24
PDLIM1O00151 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.52■□□□□ 0.24
PDLIM1O00151 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDLIM1O00151 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDLIM1O00151 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.52■□□□□ 0.23
PDLIM1O00151 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDLIM1O00151 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDLIM1O00151 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PDLIM1O00151 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PDLIM1O00151 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.52■□□□□ 0.23
PDLIM1O00151 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PDLIM1O00151 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PDLIM1O00151 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
PDLIM1O00151 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PDLIM1O00151 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.51■□□□□ 0.23
PDLIM1O00151 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.51■□□□□ 0.23
PDLIM1O00151 BX664615.1-201ENST00000443558 458 ntBASIC16.51■□□□□ 0.23
PDLIM1O00151 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.51■□□□□ 0.23
PDLIM1O00151 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.51■□□□□ 0.23
PDLIM1O00151 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.51■□□□□ 0.23
PDLIM1O00151 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.51■□□□□ 0.23
PDLIM1O00151 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PDLIM1O00151 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.51■□□□□ 0.23
PDLIM1O00151 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM1O00151 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.51■□□□□ 0.23
PDLIM1O00151 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM1O00151 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.5■□□□□ 0.23
PDLIM1O00151 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM1O00151 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM1O00151 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PDLIM1O00151 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.5■□□□□ 0.23
PDLIM1O00151 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.5■□□□□ 0.23
PDLIM1O00151 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.5■□□□□ 0.23
PDLIM1O00151 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM1O00151 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM1O00151 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM1O00151 AC022898.2-201ENST00000616822 1312 ntBASIC16.5■□□□□ 0.23
PDLIM1O00151 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM1O00151 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM1O00151 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms