Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 AC004870.1-201ENST00000315132 882 ntBASIC16.22■□□□□ 0.19
CLCA1A8K7I4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 TSPY12P-201ENST00000421279 868 ntBASIC16.22■□□□□ 0.19
CLCA1A8K7I4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 AC011840.4-201ENST00000578471 627 ntBASIC16.22■□□□□ 0.19
CLCA1A8K7I4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.22■□□□□ 0.19
CLCA1A8K7I4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCA1A8K7I4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 KRT17P6-201ENST00000453795 1220 ntBASIC16.21■□□□□ 0.19
CLCA1A8K7I4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.21■□□□□ 0.19
CLCA1A8K7I4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLCA1A8K7I4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCA1A8K7I4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CLCA1A8K7I4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.21■□□□□ 0.18
CLCA1A8K7I4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLCA1A8K7I4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCA1A8K7I4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLCA1A8K7I4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCA1A8K7I4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLCA1A8K7I4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CLCA1A8K7I4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CLCA1A8K7I4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
CLCA1A8K7I4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA1A8K7I4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCA1A8K7I4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms