Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 GNAS-203ENST00000306120 1878 ntBASIC23.22■■□□□ 1.31
SBNO1A3KN83 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 ABALON-201ENST00000629058 1903 ntBASIC23.22■■□□□ 1.31
SBNO1A3KN83 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SBNO1A3KN83 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC23.22■■□□□ 1.31
SBNO1A3KN83 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SBNO1A3KN83 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SBNO1A3KN83 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC23.21■■□□□ 1.31
SBNO1A3KN83 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SBNO1A3KN83 WASH6P-202ENST00000359512 1437 ntBASIC23.21■■□□□ 1.31
SBNO1A3KN83 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC23.21■■□□□ 1.31
SBNO1A3KN83 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SBNO1A3KN83 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SBNO1A3KN83 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SBNO1A3KN83 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SBNO1A3KN83 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SBNO1A3KN83 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SBNO1A3KN83 AC087289.5-201ENST00000586076 3175 ntBASIC23.21■■□□□ 1.31
SBNO1A3KN83 COX5BP8-201ENST00000416911 349 ntBASIC23.21■■□□□ 1.31
SBNO1A3KN83 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC23.21■■□□□ 1.31
SBNO1A3KN83 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC23.21■■□□□ 1.31
SBNO1A3KN83 AL512638.1-201ENST00000457493 794 ntBASIC23.21■■□□□ 1.31
SBNO1A3KN83 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC23.21■■□□□ 1.31
SBNO1A3KN83 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC23.21■■□□□ 1.31
SBNO1A3KN83 AP000842.3-202ENST00000569238 1080 ntBASIC23.21■■□□□ 1.31
SBNO1A3KN83 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC23.21■■□□□ 1.31
SBNO1A3KN83 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC23.21■■□□□ 1.31
SBNO1A3KN83 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SBNO1A3KN83 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC23.21■■□□□ 1.31
SBNO1A3KN83 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC23.2■■□□□ 1.31
SBNO1A3KN83 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
SBNO1A3KN83 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SBNO1A3KN83 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.2■■□□□ 1.3
SBNO1A3KN83 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SBNO1A3KN83 MIR346-201ENST00000362234 95 ntBASIC23.2■■□□□ 1.3
SBNO1A3KN83 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SBNO1A3KN83 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC23.2■■□□□ 1.3
SBNO1A3KN83 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
SBNO1A3KN83 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SBNO1A3KN83 COQ4-205ENST00000609948 956 ntTSL 2 BASIC23.2■■□□□ 1.3
SBNO1A3KN83 AC008267.7-201ENST00000624570 1194 ntBASIC23.2■■□□□ 1.3
SBNO1A3KN83 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SBNO1A3KN83 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC23.2■■□□□ 1.3
SBNO1A3KN83 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SBNO1A3KN83 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SBNO1A3KN83 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC23.2■■□□□ 1.3
SBNO1A3KN83 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SBNO1A3KN83 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
SBNO1A3KN83 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SBNO1A3KN83 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SBNO1A3KN83 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.19■■□□□ 1.3
SBNO1A3KN83 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC23.19■■□□□ 1.3
SBNO1A3KN83 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SBNO1A3KN83 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC23.19■■□□□ 1.3
SBNO1A3KN83 AC241585.1-201ENST00000433527 519 ntBASIC23.19■■□□□ 1.3
SBNO1A3KN83 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SBNO1A3KN83 AL596325.1-201ENST00000563991 1082 ntBASIC23.19■■□□□ 1.3
SBNO1A3KN83 COQ9-214ENST00000567933 882 ntTSL 3 BASIC23.19■■□□□ 1.3
SBNO1A3KN83 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SBNO1A3KN83 AL662799.1-202ENST00000614205 422 ntBASIC23.19■■□□□ 1.3
SBNO1A3KN83 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SBNO1A3KN83 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SBNO1A3KN83 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC23.19■■□□□ 1.3
SBNO1A3KN83 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SBNO1A3KN83 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SBNO1A3KN83 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC23.19■■□□□ 1.3
SBNO1A3KN83 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SBNO1A3KN83 AC012569.1-201ENST00000591191 1524 ntBASIC23.19■■□□□ 1.3
SBNO1A3KN83 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SBNO1A3KN83 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SBNO1A3KN83 LINC00304-203ENST00000565008 1864 ntBASIC23.19■■□□□ 1.3
SBNO1A3KN83 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
SBNO1A3KN83 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SBNO1A3KN83 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SBNO1A3KN83 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 CALY-202ENST00000368555 783 ntTSL 2 BASIC23.18■■□□□ 1.3
SBNO1A3KN83 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SBNO1A3KN83 TSSK5P-201ENST00000423978 907 ntBASIC23.18■■□□□ 1.3
SBNO1A3KN83 NME2P1-201ENST00000426182 414 ntBASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms