Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 AL645929.1-201ENST00000420084 975 ntBASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 TSPY22P-201ENST00000427496 604 ntBASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 AC124864.1-201ENST00000623408 392 ntBASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV9S1A1TA0A576 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 AL135999.2-201ENST00000622438 1686 ntBASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 FAM220CP-201ENST00000395253 831 ntBASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 AC063952.2-201ENST00000498792 1227 ntBASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 AL353593.2-201ENST00000602529 1483 ntBASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.42■□□□□ 0.38
TCRBV9S1A1TA0A576 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 AC079328.2-201ENST00000561241 3354 ntBASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms