Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 MMP23A-201ENST00000234610 1017 ntBASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 RASA4DP-201ENST00000460726 1199 ntBASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 AL136038.4-201ENST00000603606 1261 ntBASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 AC141257.4-201ENST00000634557 245 ntBASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 AC136944.6-201ENST00000634818 245 ntBASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV5A0A0B4J249 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 AL023973.1-201ENST00000624619 620 ntBASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV5A0A0B4J249 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms