Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 MIR1224-201ENST00000408193 85 ntBASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 AL845331.1-201ENST00000424978 1190 ntBASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 TOB2P1-201ENST00000469761 992 ntBASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 AC009533.2-201ENST00000543664 586 ntBASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 AL138831.2-201ENST00000606564 490 ntBASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 AC069148.1-201ENST00000608741 768 ntBASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 AC091076.1-201ENST00000610741 619 ntBASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 AC010331.1-201ENST00000611423 582 ntBASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 AL139327.4-201ENST00000612362 153 ntBASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 AL445228.2-201ENST00000605589 952 ntBASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 AL353801.3-201ENST00000609898 542 ntBASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRGV1A0A0A0MS02 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TRGV1A0A0A0MS02 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRGV1A0A0A0MS02 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms