Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 AC003669.1-201ENST00000334569 611 ntBASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 KLF4P1-201ENST00000412782 1185 ntBASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 AL020989.1-201ENST00000422979 469 ntBASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.38■□□□□ 0.69
COL4A3BPQ9Y5P4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 AC016396.2-201ENST00000562575 1417 ntBASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 PRYP5-201ENST00000451909 266 ntBASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 STK19B-204ENST00000512515 211 ntBASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 AC107918.4-202ENST00000641623 219 ntBASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A3BPQ9Y5P4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 AC012640.2-201ENST00000561606 901 ntBASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 AC116407.3-201ENST00000623905 1129 ntBASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 AC046185.3-201ENST00000623228 1824 ntBASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 AC148477.5-201ENST00000625164 1645 ntBASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A3BPQ9Y5P4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL4A3BPQ9Y5P4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms