Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 AL031284.1-201ENST00000419297 478 ntBASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 RNPS1P1-201ENST00000507437 918 ntBASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 AC025062.2-201ENST00000605477 670 ntBASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 AL691403.2-201ENST00000618460 490 ntBASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAI2Q9Y5P3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RAI2Q9Y5P3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.52■□□□□ 0.39
RAI2Q9Y5P3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAI2Q9Y5P3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAI2Q9Y5P3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RAI2Q9Y5P3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAI2Q9Y5P3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAI2Q9Y5P3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAI2Q9Y5P3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 AC073648.2-201ENST00000510116 352 ntBASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 AC148477.8-201ENST00000624298 468 ntBASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RAI2Q9Y5P3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAI2Q9Y5P3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms