Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB1Q9Y5F3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB1Q9Y5F3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PCDHB1Q9Y5F3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHB1Q9Y5F3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHB1Q9Y5F3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHB1Q9Y5F3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PCDHB1Q9Y5F3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB1Q9Y5F3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHB1Q9Y5F3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHB1Q9Y5F3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 RPS2P1-201ENST00000434010 821 ntBASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 SART3-203ENST00000546611 1184 ntBASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 INTS4P1-201ENST00000438455 1935 ntBASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 AC020916.1-201ENST00000587762 1774 ntBASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB1Q9Y5F3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 IGHV3-22-201ENST00000520721 359 ntBASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 AC145285.3-201ENST00000564603 959 ntBASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 STK25P1-201ENST00000585406 838 ntBASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 AL356488.2-201ENST00000602755 427 ntBASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 AC140113.2-201ENST00000604370 208 ntBASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 AC108860.2-201ENST00000562760 2183 ntBASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB1Q9Y5F3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 MED15P5-201ENST00000423150 992 ntBASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 AC027601.4-201ENST00000611259 610 ntBASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 AC046185.3-201ENST00000623228 1824 ntBASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB1Q9Y5F3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB1Q9Y5F3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms