Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZC3H4Q9UPT8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZC3H4Q9UPT8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.81■□□□□ 0.92
ZC3H4Q9UPT8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.81■□□□□ 0.92
ZC3H4Q9UPT8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.81■□□□□ 0.92
ZC3H4Q9UPT8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZC3H4Q9UPT8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.81■□□□□ 0.92
ZC3H4Q9UPT8 AL049812.1-201ENST00000432563 2267 ntBASIC20.81■□□□□ 0.92
ZC3H4Q9UPT8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZC3H4Q9UPT8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 AC107918.2-201ENST00000530817 355 ntBASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 AC109635.5-201ENST00000533593 962 ntBASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ZC3H4Q9UPT8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 AC084346.2-201ENST00000607097 949 ntBASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 AL138781.2-201ENST00000617896 1843 ntBASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 AC093677.2-201ENST00000600169 1863 ntBASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ZC3H4Q9UPT8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 GIMAP3P-201ENST00000495150 836 ntBASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 AL009183.1-201ENST00000603760 355 ntBASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 GNAS-203ENST00000306120 1878 ntBASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 AL162274.1-201ENST00000617191 1098 ntBASIC20.78■□□□□ 0.92
ZC3H4Q9UPT8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.77■□□□□ 0.92
ZC3H4Q9UPT8 PHGDH-209ENST00000641074 1780 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms