Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 AC090340.1-201ENST00000620778 4980 ntBASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
HDAC6Q9UBN7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 RPS8P6-201ENST00000426177 609 ntBASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 AC004832.2-201ENST00000426397 482 ntBASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 DNAJB3-201ENST00000446806 729 ntBASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 MIR3687-2-201ENST00000577708 61 ntBASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 MIR3687-1-201ENST00000614492 61 ntBASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 AL589182.2-201ENST00000619332 1049 ntBASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 AC148477.5-201ENST00000625164 1645 ntBASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HDAC6Q9UBN7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 FLJ13224-201ENST00000313737 1514 ntBASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 AC002347.1-201ENST00000569543 541 ntBASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HDAC6Q9UBN7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 KRT18P2-201ENST00000447938 1258 ntBASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 AC004706.3-202ENST00000621574 984 ntBASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 AC006504.4-201ENST00000592118 1568 ntBASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC6Q9UBN7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
HDAC6Q9UBN7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms