Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 IGHV3-52-201ENST00000519770 353 ntBASIC18.12■□□□□ 0.49
CHD7Q9P2D1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 AC017083.2-201ENST00000608069 979 ntBASIC18.12■□□□□ 0.49
CHD7Q9P2D1 AL161645.1-201ENST00000622716 1255 ntBASIC18.12■□□□□ 0.49
CHD7Q9P2D1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 KRT17P7-201ENST00000451704 1104 ntBASIC18.12■□□□□ 0.49
CHD7Q9P2D1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 AC119751.2-201ENST00000504529 210 ntBASIC18.12■□□□□ 0.49
CHD7Q9P2D1 AC004233.3-201ENST00000607794 1269 ntBASIC18.12■□□□□ 0.49
CHD7Q9P2D1 AL590560.3-201ENST00000623350 461 ntBASIC18.12■□□□□ 0.49
CHD7Q9P2D1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CHD7Q9P2D1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 MIR4525-201ENST00000580000 75 ntBASIC18.11■□□□□ 0.49
CHD7Q9P2D1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHD7Q9P2D1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 API5-211ENST00000534695 560 ntTSL 5 BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 HMGA1P7-201ENST00000406908 502 ntBASIC18.1■□□□□ 0.49
CHD7Q9P2D1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD7Q9P2D1 LINC00896-202ENST00000609602 2128 ntBASIC18.1■□□□□ 0.49
CHD7Q9P2D1 TMEM14DP-201ENST00000422205 345 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms