Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GPR89P-201ENST00000407924 1495 ntBASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 AL121761.2-201ENST00000598007 1648 ntBASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 AC079781.3-201ENST00000449110 356 ntBASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 AL589182.2-201ENST00000619332 1049 ntBASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 NCF1C-201ENST00000438382 1427 ntBASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 AC009053.2-201ENST00000563701 2365 ntBASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 SCARNA2-201ENST00000458748 420 ntBASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 KRT126P-201ENST00000549467 1181 ntBASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 AL121912.1-201ENST00000603683 238 ntBASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BLOC1S4Q9NUP1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 PRORSD1P-202ENST00000563365 2154 ntBASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 DUX4L17-201ENST00000557360 1267 ntBASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 AL139424.1-201ENST00000607572 797 ntBASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms