Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CISHQ9NSE2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.46■□□□□ 0.55
CISHQ9NSE2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.46■□□□□ 0.55
CISHQ9NSE2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.46■□□□□ 0.55
CISHQ9NSE2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.46■□□□□ 0.55
CISHQ9NSE2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CISHQ9NSE2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CISHQ9NSE2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CISHQ9NSE2 AC012313.1-201ENST00000593393 3059 ntBASIC18.46■□□□□ 0.54
CISHQ9NSE2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CISHQ9NSE2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.54
CISHQ9NSE2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 KRT18P67-201ENST00000432816 1264 ntBASIC18.45■□□□□ 0.54
CISHQ9NSE2 RPS2P1-201ENST00000434010 821 ntBASIC18.45■□□□□ 0.54
CISHQ9NSE2 AC018712.1-201ENST00000455767 687 ntBASIC18.45■□□□□ 0.54
CISHQ9NSE2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 AP002469.2-201ENST00000531724 424 ntBASIC18.45■□□□□ 0.54
CISHQ9NSE2 AL160237.2-201ENST00000556165 472 ntBASIC18.45■□□□□ 0.54
CISHQ9NSE2 AC139887.3-201ENST00000568585 713 ntBASIC18.45■□□□□ 0.54
CISHQ9NSE2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 AL353135.1-201ENST00000606729 504 ntBASIC18.45■□□□□ 0.54
CISHQ9NSE2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CISHQ9NSE2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CISHQ9NSE2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CISHQ9NSE2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 EGFEM1P-202ENST00000431685 1563 ntBASIC18.44■□□□□ 0.54
CISHQ9NSE2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.44■□□□□ 0.54
CISHQ9NSE2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CISHQ9NSE2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.44■□□□□ 0.54
CISHQ9NSE2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CISHQ9NSE2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CISHQ9NSE2 HNRNPDP1-201ENST00000439535 754 ntBASIC18.44■□□□□ 0.54
CISHQ9NSE2 AF186996.4-201ENST00000467186 377 ntBASIC18.44■□□□□ 0.54
CISHQ9NSE2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.44■□□□□ 0.54
CISHQ9NSE2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.44■□□□□ 0.54
CISHQ9NSE2 AL121894.2-201ENST00000602977 491 ntBASIC18.44■□□□□ 0.54
CISHQ9NSE2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 AC148477.8-201ENST00000624298 468 ntBASIC18.44■□□□□ 0.54
CISHQ9NSE2 AC107918.4-202ENST00000641623 219 ntBASIC18.44■□□□□ 0.54
CISHQ9NSE2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.44■□□□□ 0.54
CISHQ9NSE2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CISHQ9NSE2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CISHQ9NSE2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 LINC02012-201ENST00000608206 1725 ntBASIC18.43■□□□□ 0.54
CISHQ9NSE2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms