Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 AC097493.4-201ENST00000641197 219 ntBASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 AC009949.1-201ENST00000623048 1830 ntBASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 AL121761.2-201ENST00000598007 1648 ntBASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 AC005363.2-201ENST00000618631 242 ntBASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB16Q9NRJ7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 ATP5G1P1-201ENST00000448724 379 ntBASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 GCSHP2-201ENST00000560971 527 ntBASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 AL136038.4-201ENST00000603606 1261 ntBASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 AC068587.6-202ENST00000641839 5619 ntBASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
PCDHB16Q9NRJ7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms