Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 LINC02228-204ENST00000642115 2962 ntBASIC15.81■□□□□ 0.12
HMG20AQ9NP66 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMG20AQ9NP66 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 AC233702.5-201ENST00000584107 538 ntBASIC15.8■□□□□ 0.12
HMG20AQ9NP66 AC113410.3-201ENST00000623366 203 ntBASIC15.8■□□□□ 0.12
HMG20AQ9NP66 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.8■□□□□ 0.12
HMG20AQ9NP66 DBET-201ENST00000630918 3363 ntBASIC15.79■□□□□ 0.12
HMG20AQ9NP66 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 MFAP1P1-201ENST00000442257 1255 ntBASIC15.79■□□□□ 0.12
HMG20AQ9NP66 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 SLC25A1P4-201ENST00000567977 778 ntBASIC15.79■□□□□ 0.12
HMG20AQ9NP66 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 AL049637.2-201ENST00000641778 930 ntBASIC15.79■□□□□ 0.12
HMG20AQ9NP66 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 AL109659.2-201ENST00000606809 1674 ntBASIC15.79■□□□□ 0.12
HMG20AQ9NP66 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HMG20AQ9NP66 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HMG20AQ9NP66 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms